KEGG   Pseudomonas protegens Pf-5: PFL_5188
Entry
PFL_5188          CDS       T00249                                 
Name
(GenBank) DNA-binding protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
pfl  Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:pfl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pfl03000]
    PFL_5188
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pfl02048]
    PFL_5188
Transcription factors [BR:pfl03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PFL_5188
Prokaryotic defense system [BR:pfl02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    PFL_5188
SSDB
Motif
Pfam: HTH_3 HTH_31
Other DBs
NCBI-ProteinID: AAY94407
UniProt: Q4K668
LinkDB
Position
5947433..5947804
AA seq 123 aa
MNIRPIHTDQDYRAALKSVSPLFDNEPQPGTPEGDYFDVMITLIQAYEARQFPLDLPNPI
EAIKFRMEQSGLSAADLAPAIGRTNRVYEVLNGKRALTLPMIWKLHQLFGIPAESLIKPI
KSS
NT seq 372 nt   +upstreamnt  +downstreamnt
atgaacatccgccccatccacaccgaccaggactaccgcgccgcactgaaaagcgtctcg
cccctgttcgacaacgaaccgcagcccgggacgcctgaaggcgattacttcgatgtgatg
atcaccctgatccaggcgtacgaggccaggcagtttcccctggacctgcccaacccgatc
gaggcgatcaagttccgcatggaacagtccggcttgtccgccgccgacctggcgcccgcc
atcggccgcaccaaccgcgtctacgaagtgctcaacggcaagcgcgcgctgaccctgccc
atgatctggaaactgcaccagctgttcggcattcccgccgaaagcctgatcaagccgatc
aaatcgtcctga

DBGET integrated database retrieval system