Pseudomonas protegens Pf-5: PFL_5258
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Entry
PFL_5258 CDS
T00249
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00550
Peptidoglycan biosynthesis
pfl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PFL_5258 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pfl01003
]
PFL_5258 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfl01011
]
PFL_5258 (mrcB)
Enzymes [BR:
pfl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PFL_5258 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PFL_5258 (mrcB)
Glycosyltransferases [BR:
pfl01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PFL_5258 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfl01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PFL_5258 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
AAY94472
UniProt:
Q4K603
LinkDB
All DBs
Position
complement(6022340..6024664)
Genome browser
AA seq
774 aa
AA seq
DB search
MTRTRSPRSAKKTPSGGLRPWLGWALKLSLVGLVVLAGFAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFVGQKLSKDDFLTELDALGYRRESVANGPGAASVNGNTVDLNTRGFQFYEG
LEQAQPVRVRFSGDYVAELSGSKGAKLAVVRLEPLLIGGLYPKNLEDRILIKIDQVPPYL
LETLVAVEDRDFYSHHGVSPKSIARAIWVNTSSGQMRQGGSTLTQQLVKNFFLTNERSLS
RKLNEAMMALLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQFFFSQPLSELKLH
QVALLVGMVKGPSYYNPRRYPERALERRNLVLDLLAQQGVATPEQVEAAKKMPLGVTKRG
SLADSSFPGFLDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLAGR
KGSEDVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLIKPAVYLTALEKP
SQYTLTSWLSDEAFSVKGADGQVWKPQNYDRRSHGTVFLYQGLAHSYNLSTARLGLEVGV
PNVLKTLGRLGVTREFPAFPSMLLGAGGMSPMEVATMYQTLANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQRFDAGSIYLIQSAMQRVMREGTGSSVYNVLPKTLALAGKTGTSNDSR
DSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLDMPQPDNVVQA
WVDSRTGQGSDANCPGAVQMPYIRGSEPPPGASCGGENPAGGDSVMDWVKGWMN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtacccgatcccctcgttctgctaaaaaaacgccgtctggtggcctgcgcccc
tggctgggctgggccctcaagctcagtctggtcggtttggtggtgctcgccggctttgcg
gtttacctcgatgccgtggtccaggaaaaattctccggcaagcgctggaccattccggcc
aaggtctacgcccgcccgcttgagctgttcgtcggacaaaagctcagcaaggacgatttc
cttacggaactcgacgctctgggctatcgccgtgaaagtgtcgccaacggcccgggcgca
gcctcggtcaatggcaataccgtggacctgaacacccgcggcttccagttctatgaaggg
ctggagcaggctcagccggtgcgcgtgcgcttctccggcgattacgtggcggaactgtcc
ggcagcaagggggccaagctcgcggtggtgcgcctggagccattgctgatcggcggcctg
tacccgaagaacctcgaagaccggatcctgatcaagatcgatcaggttccgccgtatctg
ctggaaactctggtggcggtggaagaccgcgacttctattcacaccacggggtgtcgccc
aagtcgattgcccgtgcgatctgggtcaacacctcgtccggccagatgcgccagggcggc
agtaccctgacccagcagttggtgaaaaacttcttcctgaccaacgagcgcagcctgtcg
cgcaagctcaatgaagcgatgatggcgttgttgctggagctgcattacgacaagcgcgag
attctcgaggcctacctcaacgaggtcttcgtcggccaggacggtcagcgtgcggtgcac
ggtttcggcctggccagccagttcttcttcagccagcccctgtccgaactcaagttgcac
caggtggcgctgttggtcgggatggtcaaagggccttcctattacaacccgcggcgctac
ccggaacgtgccctggagcggcgtaacctggtgctcgatctgctggcacagcagggcgtg
gctaccccggaacaggtggaggcggcgaagaagatgccgctgggcgtaaccaagcgcggc
agcctggcggacagttccttccccggtttcctcgacctggtcaagcgtcagttgcgcgaa
gactaccgtgatgaagacttgactgaagaaggcctgcggatcttcaccagtttcgatccg
atcctgcagatgaaggccgaagcctcggtcaacgacaccttcaagcgcctggccgggcgc
aagggctcggaagacgtcgaggcggcgatggtggtgaccaacccggaaacgggcgaggtc
caggccatgatcggcagtcgtcaggccagctttgccggtttcaaccgggccttggatgcg
gtgcgtccgatcggctcgctgatcaagcctgcggtctacctgaccgccctggaaaagccc
agccagtacaccctgaccagttggctgtcggatgaggcgttctcggtaaaaggtgcagac
ggccaggtgtggaagccgcagaactatgaccggcgctcccacggtacggtgttcctgtac
cagggcctggctcactcctacaacctgtctaccgcacggctcggcctggaagtgggtgtg
cccaatgtcctgaagacccttgggcgcctgggggtgacccgcgagttcccggccttccca
tcgatgctgctgggggcagggggcatgagcccgatggaagtggcgaccatgtaccagacg
ctggccaatggcggcttcaatacgccgatgcgcgggattcgcagcgtgttgacagcggaa
ggcgagccgctcaagcgctatccgttccagattcagcagcgcttcgatgccggctcgatc
tatctgattcaaagcgcgatgcagcgggtgatgcgcgagggcaccggcagctcggtgtac
aacgtgttgcccaagactctagcgttggcgggcaagaccggtaccagtaacgactcccgt
gacagctggttcgccggtttcagccaggacctgctagccgtggtctggctgggtcgcgac
gataacggcaagacgccgtttaccggtgctaccggcgccttgcaggtgtggaccagtttc
atgcgcaaggccgacccgctgccgctggatatgccgcagccggacaacgtggttcaggcc
tgggtcgattcgcgtactgggcagggctccgatgccaactgtccgggggctgtgcagatg
ccgtatattcgcggcagcgaaccgcctcccggtgcttcctgtgggggagaaaacccggca
ggcggcgattcggtgatggattgggtcaagggctggatgaactaa
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