Pseudomonas protegens Pf-5: PFL_5346
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Entry
PFL_5346 CDS
T00249
Symbol
glyA_2
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00260
Glycine, serine and threonine metabolism
pfl00460
Cyanoamino acid metabolism
pfl00630
Glyoxylate and dicarboxylate metabolism
pfl00670
One carbon pool by folate
pfl00680
Methane metabolism
pfl01100
Metabolic pathways
pfl01110
Biosynthesis of secondary metabolites
pfl01120
Microbial metabolism in diverse environments
pfl01200
Carbon metabolism
pfl01230
Biosynthesis of amino acids
pfl01240
Biosynthesis of cofactors
pfl04981
Folate transport and metabolism
Module
pfl_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PFL_5346 (glyA_2)
09102 Energy metabolism
00680 Methane metabolism
PFL_5346 (glyA_2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PFL_5346 (glyA_2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PFL_5346 (glyA_2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PFL_5346 (glyA_2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PFL_5346 (glyA_2)
Enzymes [BR:
pfl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PFL_5346 (glyA_2)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AAY94556
UniProt:
Q4K5R9
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All DBs
Position
6116211..6117464
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AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLQGGDTILGMS
LAHGGHLTHGAAVSSSGKLYNAIQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQEQVVKNAQAMAEV
FIARGFDVVSGGTKNHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
ccagcggtgatggaagctcaaggctcggtactgaccaacaaatacgccgaaggctaccca
ggcaagcgctactacggcggttgcgaatacgtcgacgtggttgaacagctggccatcgac
cgcgccaaggagctgttcggcgccgactacgccaacgtccagccacacgccggttcccag
gccaacgccgcggtctacctggccctgctgcaaggcggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccgcggtgtcctcctccggcaagctgtac
aacgctatccagtacggcatcgacgccaacggcctgatcgactacgacgaagtcgagcgc
ctggccgtcgagcacaagccgaaaatgatcgtggccggtttctccgcctactcgcagatc
ctcgacttcccgcgtttccgcgaaatcgctgacaaagtgggcgcctacctgttcgtcgac
atggcccacgtggccggtctggtcgccgctggcgtctacccgaacccggtgccattcgct
gacgtcgtgaccaccaccacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gctcgcgccaacgccgacatcgagaagaagctcaactccgccgtattcccgggcgcccag
ggtggcccgctggagcacgtgatcgccgctaaagcgatctgcttcaaggaagcgctgcag
cctgagttcaaggcctaccaggaacaagtggtgaagaacgcccaggccatggccgaagtg
ttcatcgcccgcggtttcgatgtggtttccggtggtaccaagaaccacctgttcctgctg
tcgctgatcaagcaggacatctccggtaaagacgccgacgccgctctgggcaaagccttc
atcaccgtgaacaagaactccgtgccaaacgatccacgctccccgttcgtcacctccggc
ctgcgcttcggtactccggccgtgaccactcgtggcttcaaggaagccgagtgcaaggaa
ctggccggctggatctgcgacatcctggcggacctgaacaacgaagcggtgatcgacgct
gtgcgtgagaaggtcaaggccatctgcaagaagctgccggtatacggcgcttaa
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