Pseudomonas protegens Pf-5: PFL_5373
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Entry
PFL_5373 CDS
T00249
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfl03016
]
PFL_5373 (trmA)
Enzymes [BR:
pfl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
PFL_5373 (trmA)
Transfer RNA biogenesis [BR:
pfl03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PFL_5373 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Cons_hypoth95
Methyltransf_11
Methyltransf_12
MTS
RrnaAD
DREV
Methyltransf_15
PrmA
TRM5-TYW2_MTfase
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AAY94583
UniProt:
Q4K5P2
LinkDB
All DBs
Position
6140901..6141980
Genome browser
AA seq
359 aa
AA seq
DB search
MTFDAASYTTQLNDKVARLRDLLAPFDAPEPQVFDSPLQNFRLRAEFRLWREAGERHYAM
FSQDDKRTPILIEEFPIASQRINQLMPRLKAAWQASAPLSHKLFQVEFLTTLAGDAMITL
CYHRPLDEHWHKAASQLAADLKVSVIGRSKGKREVIGQDYVVEKLEVGGRTFSYRQPEGA
FTQPNGTVNQKMLNWAYEALGERQDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNA
ALSNLSENAVDNVTLVRLSAEELTEALNEVRPFRRLQGVDLKSYEFGSVFVDPPRAGMDP
DTCELTRRFDNILYISCNPETLAANIAQLHDTHRITRCALFDQFPWTHHMESGVLLTRR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgacgccgcaagctacaccacccagttgaatgacaaggtcgcgcgcttgcgc
gacctgctggcccccttcgatgcgcccgagcctcaggtcttcgactcgcccctgcagaac
ttccgcctgcgggcagagttccgcctgtggcgcgaggccggggaacggcactacgcgatg
ttctcccaggacgacaagcgcacaccgatcctcatcgaggaattccccatcgccagccag
cgcatcaaccagttgatgccccggctcaaggccgcctggcaagccagcgcgcccctgagc
cacaagctgttccaggtggagttcctcaccaccctggccggcgacgcgatgatcaccctg
tgctaccaccgcccgctggacgaacactggcacaaggcggcaagccaattggccgccgac
ctcaaggtcagcgtgatcggtcgctccaagggcaagcgcgaagtcatcggccaggactac
gtggtggaaaagctcgaagtcggcgggcgtaccttcagctaccgccagcccgaaggcgcc
ttcacccagcccaacggcacggtgaaccagaagatgctcaactgggcctatgaagccctg
ggagagcgccaggacgacctgctggagctgtactgcggcaatggcaacttcaccctgccc
ctggccacccgggtgcgcaaggtgctggccaccgagatcagcaagacctcggtgaatgcc
gccttgagcaacctcagcgaaaacgctgtggataacgtcaccctggtgcgtctgtccgcc
gaggagctgactgaagccttgaacgaagttcgtccgttccgccgcctgcagggcgtggac
ctcaagagctacgaattcggcagcgtgttcgtcgacccgccccgggccggcatggacccg
gacacctgcgaactgacccggcgcttcgacaacatcctgtacatctcctgcaacccggaa
accctggcggccaacatcgcccagttgcacgacacccaccgcatcacccgttgtgcgctg
ttcgaccagttcccctggacccaccatatggaatccggggtcctgctgacccgccgctga
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