Pseudomonas protegens Pf-5: PFL_5376
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Entry
PFL_5376 CDS
T00249
Symbol
hasD
Name
(GenBank) type 1 secretion system ATPase HasD
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PFL_5376 (hasD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfl02000
]
PFL_5376 (hasD)
02044 Secretion system [BR:
pfl02044
]
PFL_5376 (hasD)
Transporters [BR:
pfl02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PFL_5376 (hasD)
Secretion system [BR:
pfl02044
]
Type I secretion system
Multiple protein transporter
PFL_5376 (hasD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA
STAS
AAA_25
AAA_16
RsgA_GTPase
AAA_22
nSTAND3
AAA_33
NACHT
Rad17
nSTAND1
AAA_18
PRK
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AAY94586
UniProt:
Q4K5N9
LinkDB
All DBs
Position
complement(6144870..6146666)
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AA seq
598 aa
AA seq
DB search
MSRPNPLAASETLAALTAYKGGFFNIGLFSAVINLLMLAPALYMLQVYDRVLASGNQMTL
LMLTLMILGLFGLMGALEWVRSQVVIHLGTQMDMRLNQRVYDAAFEAQLKGSPQAAGQAL
NDLTALRQFATGNALFAFFDAPWFPVYLLVIFLFHPWLGLLALAGAVLLVALAWINQHIC
QAPLAQASQLSIITSQQATANLRNADAIEAMGMLGALRERWFIGHQGFLAQQNLASEKTA
TISAWSKGVRMALQSLVLGLGAWLAVQGQITPGMMIAGSILMGRVLSPIDQLIAVWKQWS
SARLAYERLSGLLQANPPRPARMSLPTPKGKLSVEQLSACAPGSRRPALSNLGFTLEAGQ
VLGVIGPSGCGKSTLARLLVGAWTPLTGKVRLDGADLAQWDRQQLGPHIGYLPQDIQLFA
GSIAENIARFAQLDSDQVLQAAQMAGVHELILQLPQGYDTRLGEGGAGLSGGQRQRIGLA
RALYGLPALIVLDEPNSNLDEAGEQALLQAISQLKQRQRTLVLITHKPNVLTLTDQLMIL
RDGQLQAYGPTARVLEANQKAKAAPPPAVSMSNPASSPVTSLNMNYRLGVAGGEGKKA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggccgaatccacttgccgcttccgagacgctggcggccttgacggcctacaag
ggcggctttttcaacatcggcctgttctcggcggtgatcaacctgctgatgctggccccg
gccctttacatgctgcaggtctacgaccgggtgctggcctcgggcaatcagatgaccctg
ctgatgctgacgctgatgatcctcggcctgttcggcctgatgggggcgttggagtgggtg
cgtagccaggtggtgatccacctcggtacccagatggacatgcgcctgaaccagcgggtg
tatgacgccgctttcgaagcccagctcaagggcagcccccaggccgccggccaggctttg
aacgacctgaccgcgctgcgccagttcgccaccggcaatgccttgttcgcgttcttcgat
gcgccctggtttccggtctacctgctggtgatctttctctttcacccctggctcggcctg
ctggccctggccggcgcggtgctgctggtggcgctggcctggatcaaccagcatatctgc
caggcaccgctggcccaggccagccagttgtcgatcatcaccagccagcaggccaccgcc
aacctgcgcaatgccgacgcgatcgaagccatgggcatgctcggcgccctgcgcgagcgc
tggttcatcggccaccagggctttctggcccagcagaacctggccagcgaaaagaccgcc
accatcagcgcctggtccaagggcgtgcgcatggccctgcagtccctggtgctgggcctg
ggcgcctggctggcggtgcaggggcagatcactccggggatgatgatcgccggttcgatc
ctcatgggccgcgtactcagccccatcgaccagttgatcgcggtatggaagcaatggagt
tcggcgcgcctggcctacgagcgtttgtccgggttgttgcaggccaacccgccgcgcccg
gcacgcatgagcctgccgacgcccaagggcaagttgagcgtcgaacagttgagcgcctgt
gcaccgggcagccgtcgcccggctttgagcaaccttggcttcaccctggaggctggccag
gtgctgggggtgatcggcccttccggctgtggcaagtcgaccctggcccggctgctggtc
ggtgcctggacgcccctgacgggaaaggtacgcctggatggcgcagacctggctcagtgg
gacaggcagcaactgggaccgcatatcggttacctgccccaggacatccagctgttcgcc
ggcagcatcgccgagaacatcgcgcgttttgcccagctggactcggatcaggtcctgcag
gccgcacaaatggccggggtgcacgaactgatcctgcaattgccccagggctatgacacg
cgcctgggcgagggcggtgccgggttgtccggcgggcagcgccagcgcatcggcttggcc
cgggcgctgtacggcctgccggcgctgatcgtgctcgacgagcccaattccaacctcgat
gaggccggtgagcaggcgctgctgcaagccatcagccagctcaagcagcggcagcgaacc
ctggtgctgatcacccacaagcccaacgtgctgaccctgaccgaccagttgatgatcctg
cgcgacggccagttgcaggcctatggtcctacggcgcgggtgctggaggcgaaccagaag
gccaaggccgcgccgccgccggctgtatcgatgagcaatccggcgagcagcccggtgacc
agcttgaacatgaactaccgcctgggcgtggccggcggcgaagggaaaaaagcatga
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