Pseudomonas protegens Pf-5: PFL_5396
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Entry
PFL_5396 CDS
T00249
Symbol
pcaH_2
Name
(GenBank) protocatechuate 3,4-dioxygenase, beta subunit
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00362
Benzoate degradation
pfl01100
Metabolic pathways
pfl01120
Microbial metabolism in diverse environments
pfl01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PFL_5396 (pcaH_2)
00624 Polycyclic aromatic hydrocarbon degradation
PFL_5396 (pcaH_2)
Enzymes [BR:
pfl01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
PFL_5396 (pcaH_2)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Ig_DR_A0283-like
SdrD_B
DUF4198
Motif
Other DBs
NCBI-ProteinID:
AAY94606
UniProt:
Q4K5L9
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All DBs
Position
complement(6166004..6166723)
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AA seq
239 aa
AA seq
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MSDADSSRFVIRDRNWHPKALTPDYKTSVTRSPRQALVSIPQSVSETTGPDFSHLRTGRF
DNDLLLNFNNGGLPVGERIIVSGRVCDQYGKPIPHTLVEMWQANAGGRYRHKNDRYLAPL
DPNFGGVGRALTDRDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFSISGPSIATRLITQLY
FEGDPLIPLCPIVKSIANPDAVQSLIARLDMGGANPMDCLAYRFDIVLRGQRKTHFENC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcagacagcagtcgcttcgtgattcgcgaccgtaattggcaccccaaggcc
ctgacccccgactacaagacctccgtcactcgctccccgcgccaggcgctggtgagcatt
ccacaatcggtcagtgaaaccacaggcccggacttttcccacctgcgcaccgggcgtttc
gacaacgacctgctgctcaacttcaacaacggtggcttgcccgtgggcgagcggatcatc
gtttccgggcgggtctgcgatcagtacggcaaacccattccccataccctggtggaaatg
tggcaagccaacgccggcggccgctaccggcacaagaacgaccgctacctggcgcccctg
gacccgaacttcggtggcgtcggccgggccctcaccgaccgtgatggctactacagtttc
cgcaccatcaagcccggcccctacccgtggcgcaacggccccaatgactggcgcccggcg
catatccatttctccatcagtggcccgtcgatcgccacgcgcctgatcacccagctgtat
ttcgaaggcgacccgctgatcccgctgtgcccgatcgtcaagtccatcgccaacccggac
gcggtacagagcctgatcgcgcgcctggacatgggcggcgccaaccccatggattgcctg
gcctaccgcttcgacatcgtgctgcgcggccagcgcaagacccacttcgagaactgctga
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