Pseudomonas protegens Pf-5: PFL_5449
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Entry
PFL_5449 CDS
T00249
Name
(GenBank) lipoprotein, RlpA family
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfl01011
]
PFL_5449
Enzymes [BR:
pfl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PFL_5449
Peptidoglycan biosynthesis and degradation proteins [BR:
pfl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PFL_5449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
AAY94659
UniProt:
Q4K5G6
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All DBs
Position
complement(6219451..6220449)
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AA seq
332 aa
AA seq
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MLAMPIRKPLKLVAFAALSLLVVSCSTSRSPQQKSSTAVRSMPGLDVNRAHKDGAPWWDV
DVSRIPDATPTLHTGPYKANPYTVLGKTYFPIQESKNYVASGTASWYGTKFHGQNTANGE
VYDLYGMSAAHKTLPLPSYVKVTNLDNNRSVILRVNDRGPFYSDRIIDLSYAAAKKLGYA
ETGTARVKVEGIDPQQWWAQRGRPAPLMLNEPQVAQNSAPVVTASAGTVEQWTPPPQQHA
AAVVPVQVKNTAAASGQYLQVGAFANPDAAELLRSKLSGMVSAPVFISSIVRNQQTLHRV
RLGPFGTPGEAQQAQNSVRLANLGQASVVSAE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaatgccaattcgcaaacccctgaagctggtggcttttgccgcgttgtccttg
ctggtggtcagttgctcgacgagtcgctcgccgcagcagaaatcttccaccgctgtgcgt
tccatgccgggcctggacgtcaaccgcgcccacaaggatggcgcgccgtggtgggatgtc
gacgtttcgcgcatccccgatgcgaccccgaccctgcataccggcccctacaaggccaac
ccctacacggtactgggcaagacctatttccccatccaggaatcgaagaactacgtggcc
tccggcacggcgtcctggtatggcaccaagttccacggccagaacaccgccaatggcgag
gtctatgacctgtacggcatgagtgccgcgcacaagaccctgccgttgcccagttacgtg
aaggtcaccaacctggacaacaatcgcagcgtgatcctgcgggtcaacgaccgtgggccg
ttctattccgaccggatcatcgacctttcctacgccgcggccaagaagctcggctatgcc
gagaccggcaccgcccgggtcaaggtcgagggcatcgatccgcagcaatggtgggctcag
cgtggccgtccggcgccgctgatgctcaacgagccgcaagtggcgcagaatagcgcgccg
gtggttacggcctcggccggcactgtcgaacaatggaccccgccgccccagcagcacgcg
gcggctgtggttcccgtacaagtgaaaaacacggcagcagcttctggccagtatctgcag
gtgggcgccttcgccaaccctgacgctgccgagctgttgaggtcgaaattgagtggcatg
gtgagcgccccggtgttcatcagctcgatcgtccgcaatcaacagacgctgcatcgggtc
cgcctggggccattcggcacgccgggtgaggcccagcaagcgcagaacagcgtacgcctg
gcgaaccttgggcaggccagcgtggtctctgccgagtaa
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