Pseudomonas protegens Pf-5: PFL_5638
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Entry
PFL_5638 CDS
T00249
Name
(GenBank) polyamine ABC transporter, periplasmic polyamine-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFL_5638
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfl02000
]
PFL_5638
Transporters [BR:
pfl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PFL_5638
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AAY94831
UniProt:
Q4K4Y6
LinkDB
All DBs
Position
complement(6421071..6422114)
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AA seq
347 aa
AA seq
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MLRSLKFTALALGMMGAAHAMAAGPDLTVVSFGGANKAAQVKAFYAPWEAAGKGKIIAGE
YNGEMAKIKAMVDTKSVSWDLVEVESPELSRGCDEDMFEQLDPALFGNSEDYVKGAIQPC
GVGFFVWSTVLAYNADKLKTAPSSWADFWDVKQFPGKRGLRKGAKYTLEFALMADGVAPK
DVYKVLAGKDGQDRAFKKLDELKPYIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKE
SNLKVVWNGGIYDFDAWAIPKGLDKARAEAAKKFIAYSVQPQQQKTYSENIAYGPANTQA
VPLLAKDILKDMPTTPENIANQVQIDVSFWADNGEQLEQRFNAWAAK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgttgagatccctgaaattcaccgccctggcactgggcatgatgggtgcggcgcacgcc
atggcggcgggcccggacctgaccgtggtgtcctttggcggggcgaacaaggcggcccag
gtcaaggccttctatgccccttgggaagcggcgggcaagggcaagatcatcgccggcgaa
tacaacggcgaaatggccaagatcaaggccatggtcgacaccaagagcgtgtcctgggac
ctggtagaagtggagtccccggaactgtcccgcggttgcgacgaggacatgttcgagcaa
ctggacccggcgctgttcggtaacagcgaagactacgtcaagggcgcgatccagccgtgc
ggcgtgggctttttcgtctggtccacggtactggcctacaacgccgacaagctgaaaacc
gctccgagcagttgggctgatttctgggacgtcaagcagttcccgggcaagcgcggcctg
cgcaagggcgccaagtacaccctggagttcgccctgatggccgacggcgtcgcgcccaag
gacgtgtacaaggtcctggccggcaaggatggccaggaccgtgccttcaagaaactcgac
gagctcaagccctacattcagtggtgggaagccggcgcccagccgccgcagtacctggct
tccggcgatgtggtcatgagctcggcctacaacggccggatcgccgcggtgcagaaggaa
agcaacctgaaagtggtgtggaacggcggcatctacgacttcgacgcctgggccattcca
aaaggcctggacaaggctcgcgccgaagcggcgaagaagttcatcgcctactcggtgcaa
ccgcagcagcagaaaacctattcggagaatatcgcctacggcccggccaacacccaggcc
gtgccgctgctggccaaggacatcctcaaggacatgccgaccactccggaaaacatcgcc
aaccaggtgcagatcgacgtcagcttctgggctgacaacggtgagcaactggaacagcgc
ttcaacgcctgggcagccaagtaa
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