Pseudomonas protegens Pf-5: PFL_5727
Help
Entry
PFL_5727 CDS
T00249
Symbol
soxD
Name
(GenBank) sarcosine oxidase, delta subunit
KO
K00304
sarcosine oxidase, subunit delta [EC:
1.5.3.24
1.5.3.1
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00260
Glycine, serine and threonine metabolism
pfl01100
Metabolic pathways
Module
pfl_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PFL_5727 (soxD)
Enzymes [BR:
pfl01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PFL_5727 (soxD)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PFL_5727 (soxD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SoxD
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AAY94917
UniProt:
Q4K4P8
LinkDB
All DBs
Position
complement(6525995..6526297)
Genome browser
AA seq
100 aa
AA seq
DB search
MLHIFCPHCGELRSEEEFHSSGQAHIPRPLDPNACTDEEWGDYMFFRDNPRGLHHELWIH
AAGCRQYFNATRDTVTYEILETYKIGTKPQFTAKAAGEKV
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatatcttctgtcctcactgcggcgagctgcgctccgaagaggaattccattcg
tccggccaggcgcacattccccggcccctggaccccaacgcctgcaccgacgaggagtgg
ggcgactacatgttcttccgcgacaaccctcgcggcctgcaccacgagttgtggatccac
gccgccggttgccgccagtacttcaacgctacccgcgacaccgtgacctacgaaattctt
gagacctacaagatcggcaccaagccgcaattcaccgccaaggctgctggagagaaggta
tga
DBGET
integrated database retrieval system
