Pseudomonas protegens Pf-5: PFL_5729
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Entry
PFL_5729 CDS
T00249
Symbol
glyA_3
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00260
Glycine, serine and threonine metabolism
pfl00460
Cyanoamino acid metabolism
pfl00630
Glyoxylate and dicarboxylate metabolism
pfl00670
One carbon pool by folate
pfl00680
Methane metabolism
pfl01100
Metabolic pathways
pfl01110
Biosynthesis of secondary metabolites
pfl01120
Microbial metabolism in diverse environments
pfl01200
Carbon metabolism
pfl01230
Biosynthesis of amino acids
pfl01240
Biosynthesis of cofactors
pfl04981
Folate transport and metabolism
Module
pfl_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PFL_5729 (glyA_3)
09102 Energy metabolism
00680 Methane metabolism
PFL_5729 (glyA_3)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PFL_5729 (glyA_3)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PFL_5729 (glyA_3)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PFL_5729 (glyA_3)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PFL_5729 (glyA_3)
Enzymes [BR:
pfl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PFL_5729 (glyA_3)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AAY94919
UniProt:
Q4K4P6
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All DBs
Position
complement(6527586..6528839)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAINAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSEVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTRTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKAYQQQVIDNAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCTELAGWICDILDHLGDADVEANVARQVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggccatcaat
gccgaggaacaacgccaggaagatcacatcgagctgatcgcgtcggaaaactacaccagc
aagcgggtgatgcaggcgcaaggcagcgggctgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagcacgtggacaaggtcgaggccctggccatcgag
cgcgccaagcaactgttcggtgccgactacgccaacgtccagccgcactccggttcttcg
gccaacagcgaggtgtacctggccctgctgcaggccggcgataccatcctcggcatgagc
ctggcccatggcggccacctgacccacggggccaaggtgtcgtcctcgggcaagctgtac
aacgcggtgcagtacggcatcgacacccgcaccgggttgatcgactacgacgaagtcgag
cgcctggccgtggaacacaagccgaagatgatcgtcgccggcttctcggcctactccaag
accctggacttcccgcgcttccggcagatcgccgacaaggtcggggcgctgctgttcgtc
gacatggcccacgtcgccgggctggtggccgccggtctgtatcccaacccgctgccctat
gccgacgtggtcactaccaccacccacaagaccctgcgcggtccccgtggcgggctgatc
ctggccaaggccaacgaagagatcgagaagaaactcaacgccgcggtattccccggcgcc
cagggcggtccgctgatgcatgtgattgcggccaaggcggtgtgcttcaaggaagcgctg
gaacctggcttcaaggcttatcagcagcaagtgatcgacaacgcccaggccatggccggc
gtgtttatcaaacgcggctacgatgtagtgtccggcggcaccgacaaccacctgttcctg
gtcagcctgattcgccagggcctgaccggcaaggatgccgatgccgccctgggccgcgcc
cacatcaccgtgaacaagaacgccgtgcccaacgacccgcagtcgccgtttgtcacgtcc
ggcctgcgcatcggcaccccggcggtcaccacccgcggtttcaaggtcacccagtgcacc
gaactggcgggctggatctgcgacattctcgaccacctcggcgatgccgacgtcgaggcc
aatgtcgcccgtcaggtggcggccctgtgtgctgatttcccggtttaccgctga
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