Pseudomonas protegens Pf-5: PFL_5811
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Entry
PFL_5811 CDS
T00249
Symbol
mdcR
Name
(GenBank) malonate utilization transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfl03000
]
PFL_5811 (mdcR)
Transcription factors [BR:
pfl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFL_5811 (mdcR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AAY95001
UniProt:
Q4K4G4
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All DBs
Position
6619015..6619932
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AA seq
305 aa
AA seq
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MLIDEELTLKKLEVFLAFMRTGNLARAAAELQTSNVSVHRAIHSLENALRCPLFKHEGRN
LTPLESAFVLEERAQKLVQDVVESVRLTREAAGFSAERFKLGALYSLTVKTVPQLIMGLK
LRRSELNIDLILGSNIDLLYKLKDMEVDAILISLDDSAHDPDCEQLPLFSDDIFLATPAD
SPFAQQSEVDLADVRDATFITLTQGFATHQDGVRVFKQAGFEPKVAMQVNDIFTLLSMVS
SGVGYALLPGRIAAVYENRVKLIPLQARYRLQQHIGVVFLKAKERDPNLLALLAECRMYA
NRQTP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgacgaagagttgaccctgaaaaagctcgaagtgtttctggccttcatgcgc
accggcaacctggcccgcgccgccgccgagttgcagaccagcaatgtcagcgtgcaccgg
gccattcactccctggaaaatgccctgcgctgcccgctgttcaagcatgaagggcgcaac
ctgacgcccctggaaagcgccttcgtcctggaggaacgggcacagaagctggtgcaggac
gtggtcgagagcgtgcgcctgacccgcgaagcggcgggcttttcagcagaacgcttcaag
ctcggcgcactttactcgctgacggtgaaaaccgtgccgcagctgatcatgggcctcaag
ctgcgccgcagcgagctgaacatcgacctgatcctgggctccaacatcgacttgctgtac
aagctcaaggacatggaagtggacgccatcctgatttccctggacgacagcgcccatgac
ccggactgcgagcaactgccgttgttttccgatgacatttttctcgccacccccgccgat
tcgccctttgcccagcagagcgaagtggacctggccgacgtgcgcgacgccaccttcatc
accctgacccagggctttgccacccatcaggacggggtgcgagtgttcaagcaggcgggg
ttcgaacccaaggtggcgatgcaggtcaacgacatcttcaccctgctgagcatggtcagc
tccggggtcggttatgcgttgctgccggggaggatcgcggcggtgtatgagaaccgcgtg
aaactgataccgctgcaggcgcgctaccgcctgcagcagcatatcggcgtggtgtttctc
aaagccaaggagcgcgacccgaacctgttggcgctgctggccgaatgccggatgtacgcc
aaccgccaaaccccctag
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