Pseudomonas protegens Pf-5: PFL_5895
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Entry
PFL_5895 CDS
T00249
Symbol
thyA
Name
(GenBank) thymidylate synthase
KO
K00560
thymidylate synthase [EC:
2.1.1.45
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00240
Pyrimidine metabolism
pfl00670
One carbon pool by folate
pfl01100
Metabolic pathways
pfl01232
Nucleotide metabolism
pfl04981
Folate transport and metabolism
Module
pfl_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PFL_5895 (thyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PFL_5895 (thyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PFL_5895 (thyA)
Enzymes [BR:
pfl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.45 thymidylate synthase
PFL_5895 (thyA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Thymidylat_synt
Motif
Other DBs
NCBI-ProteinID:
AAY95085
UniProt:
Q4K480
LinkDB
All DBs
Position
complement(6705148..6706119)
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AA seq
323 aa
AA seq
DB search
MKQYLDLVAHVINNGTKQANRTGVNTISFPGAMLRYDLKEGFPAITTRKMAFKSAIGEMV
GFLRGVNNAAEFRALGCKVWDQNANENAQWLANPFRQGDDDLGEIYGVQWRKWPAYKQIK
TSNQAAIDLALSQGYRQIAAGEEDGQGYVVLYKAIDQVRQCVDTIINDPGSRRILFHGWN
CAQLDEMALPPCHLLYQFHPNVQTREISLTLYIRSNDLGLGTPFNLTEGAALLSLIGRLT
GYTPRWFTYFIGDAHVYENHLDMLNEQLKREPFPMPKLVISERVPEFAKTGVYQPEWLEL
IEPSDFSLEGYEHHAPMTAPMAV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatatcttgatctggtggcccacgtcatcaacaacggcaccaagcaggccaac
cgcaccggtgtgaacaccatcagcttccccggggccatgctgcgctacgacctcaaggaa
ggtttcccggccatcaccacccgcaagatggccttcaagtcggccatcggcgagatggtc
ggcttcctgcgcggggtgaacaacgccgccgagtttcgtgcgctgggctgcaaggtctgg
gaccagaacgccaacgaaaacgcccagtggctggccaacccgttccgccagggcgacgac
gacctgggcgagatctacggcgtgcagtggcgcaagtggccggcctacaaacagatcaag
accagcaaccaggcggccatcgacctggcgctgagccagggctaccggcagatcgccgcg
ggcgaggaagacggccagggctacgtggtgctgtacaaggccatcgaccaggtgcgccag
tgcgtcgacaccatcatcaacgacccgggcagccggcggatcctgttccacggctggaac
tgcgcccagctggatgaaatggccttgccgccgtgccacctgctgtaccagttccacccc
aatgtccagacccgggaaatctccctgaccctctacatccgctccaacgacctgggcctg
ggcacgccgttcaacctcaccgagggtgctgcgctgctgagcctgatcggccgcctgacc
ggctacacgccgcgctggttcacctatttcatcggtgatgcccacgtctatgaaaaccat
ctggacatgctcaacgaacagctcaagcgcgagccgttcccgatgcccaagctggtgatt
tccgagcgtgtgccggagttcgccaagaccggcgtctaccagccggagtggctggagctg
atcgaaccgagcgacttctccctggaaggctatgagcaccacgcgcccatgacggcgccg
atggcggtctga
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integrated database retrieval system