KEGG   Pseudomonas protegens Pf-5: PFL_6013
Entry
PFL_6013          CDS       T00249                                 
Symbol
dapF_2
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pfl  Pseudomonas protegens Pf-5
Pathway
pfl00300  Lysine biosynthesis
pfl00470  D-Amino acid metabolism
pfl01100  Metabolic pathways
pfl01110  Biosynthesis of secondary metabolites
pfl01120  Microbial metabolism in diverse environments
pfl01230  Biosynthesis of amino acids
Module
pfl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pfl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PFL_6013 (dapF_2)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PFL_6013 (dapF_2)
Enzymes [BR:pfl01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PFL_6013 (dapF_2)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF CntK_N DUF8756
Other DBs
NCBI-ProteinID: AAY95202
UniProt: Q4K3W2
LinkDB
Position
6833286..6834116
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRNTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKRQIRVETKSGVIELDIRNDGQISVNM
GAPRLVPADIPFQAPAQADSYTLDVDGRQVQLAAVSMGNPHAVLRVDDINSAPVHELGPK
IEHHPRFPARVNVGFLQVLDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggttctcgacctg
gtcagccagcacgcgcatattctgcccaagcacgccaaacaatggggtgatcgcaatacc
gggattggcttcgatcagttgctgatcgtcgaggccccgagcaacccggatgtggatttc
cgctaccggatcttcaactccgacggctccgaagtggaacagtgcggcaatggtgcacgc
tgctttgcccgcttcgtgctggacaagcgcctgaccaccaagcgccagatccgcgtcgag
accaagagcggcgtgatcgagctggatatccgcaacgacggccagatcagcgtcaacatg
ggcgcgccgcgcctggtaccggcggacattccgttccaggcgccggcccaggccgacagc
tacaccctggacgtcgatggccgccaggtgcagttggccgcagtgtccatgggcaacccc
cacgccgtgttgcgggtggatgacatcaacagcgcgccggtgcacgagctgggtccgaag
atcgaacaccacccgcgcttcccggcgcgggtcaacgtcggttttctccaggtcctggac
cgccagcgcgcgcaactgcgggtctgggaacgcggcgccggggaaacccaggcctgcggc
accggtgcctgcgctgctgctgtggccgcgatcagccaggggtggatggattcgccccta
ttgatcgacctgccgggcgggcgcctgtccattgaatgggcaggccctggccaaccggtg
atgatgaccggcccggcagtgcgcgtatacgaaggacaggtgcgtctttaa

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