Pseudomonas protegens Pf-5: PFL_6086
Help
Entry
PFL_6086 CDS
T00249
Symbol
tssA
Name
(GenBank) type VI secretion protein TssA
KO
K11902
type VI secretion system protein ImpA
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFL_6086 (tssA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfl02044
]
PFL_6086 (tssA)
Secretion system [BR:
pfl02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFL_6086 (tssA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ImpA_N
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
AAY95274
UniProt:
Q4K3N9
LinkDB
All DBs
Position
6912942..6913961
Genome browser
AA seq
339 aa
AA seq
DB search
MDVPMLLAAVSATSPCGEDLEYDADFLHLERAAQGQPERSMGDSILPAEPPDWRSIQQQS
LDLLARSKDLRITHFLLQSTLALEGLPGLATSLELIDGLLRDYWADLHPRLDADDDNDPT
VRINALAGLASDTTIGLLREAILTRSRTFGPVSLRAALNAAGLQHFSGESLGSDHLAGAL
QDSDPEHLDAIRSALSAARSAAESIEKQVSEQVGSASGVDLTALKQPLRLALQVLGQHAP
QGAQNAVEEHADGPSTEEPGAPAAPAPVRVSGEISSREDVLRSLDRLLAYYSRHEPSSPL
PVLLNRAKNLVNADFAAIVRNLIPDGMSQFENLRGPESD
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtaccgatgttgctcgccgcggtttcagcaacttcgccttgtggcgaagacctg
gaatatgacgcggatttcttgcacttggagcgggccgcacagggccagcccgagcgcagc
atgggcgactcgatcctgccggccgagccgccggactggcgcagcatccagcaacagagc
ctggacctgctggcgcgcagcaaagacctgcgcatcacccacttcctcctgcagagcacc
ctggccctcgaaggcctgccgggcctggccaccagcctcgaactgatcgacggcctgctc
cgggattactgggcggacctgcatccgcgcctggacgccgacgacgacaacgaccccacg
gtgcgtatcaacgccctggccggcctggcgtccgacaccaccatcggcctgctccgcgaa
gccatcctgacccgttcccggaccttcggcccggtgagcctgcgagccgcgctgaacgcc
gccggcctgcagcacttttccggcgagagcctgggctccgaccacctggccggcgccctg
caagacagcgaccccgagcacctggatgcgattcgcagcgccttgagcgcagcccgctcg
gcggccgaaagcatcgagaaacaggtcagcgaacaagtaggctcggccagcggtgtagac
ctcacggccctcaagcaacccctgcgcctggcgctacaggtgctgggccagcacgccccg
caaggcgcgcagaacgcggtcgaggaacacgccgatgggccgtccaccgaagagccaggt
gcgcccgcagcgccagccccggtacgggtttccggcgagatcagcagccgcgaagacgtg
ctgcgcagccttgaccggctgctggcctactacagccgccacgagccttcgagcccgttg
ccggtgctgctcaaccgggccaagaacctggtcaacgccgacttcgcggccatcgtgcgc
aatctgattcccgacggcatgtcccaatttgaaaacctgcgcggccctgaatccgactaa
DBGET
integrated database retrieval system
