Pseudomonas protegens Pf-5: PFL_6089
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Entry
PFL_6089 CDS
T00249
Symbol
hcp
Name
(GenBank) type VI secretion system effector Hcp
KO
K11903
type VI secretion system secreted protein Hcp
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02025
Biofilm formation - Pseudomonas aeruginosa
pfl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PFL_6089 (hcp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFL_6089 (hcp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfl02044
]
PFL_6089 (hcp)
Secretion system [BR:
pfl02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFL_6089 (hcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_HCP
Motif
Other DBs
NCBI-ProteinID:
AAY95277
UniProt:
Q4K3N6
LinkDB
All DBs
Position
6916187..6916675
Genome browser
AA seq
162 aa
AA seq
DB search
MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMSQSGNMHVGGGGGAGKVNIQDLSLTK
YVDKASPNLMMHCSSGKHIDKVRLTVRKAGGESQVEYMIIDLEEVLITSLSTGGSGSDDR
LTENITLNFAQVMVEYQPQKADGTKDGGPIKYGWNIRSNTKR
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatattttcatcaagatcggtgacatcaagggcgagtccatggacaaagcc
cacaaggacgaaatcgacgtgttgaactggagctggggcatgtcccagtccggcaacatg
cacgttggcggtggcggcggcgcgggcaaggtgaacatccaggacctgtcgctgaccaag
tacgtggacaaggcatcgccgaacctgatgatgcattgctccagcggcaagcacatcgac
aaggtgcgcctgaccgtgcgcaaggccggcggcgaaagccaggtcgagtacatgatcatc
gacctggaagaagtgctgatcacttccctgagcaccggcggttcgggcagcgatgaccgc
ctgaccgaaaacatcaccctgaacttcgctcaggtgatggtcgagtaccagccgcagaaa
gccgacggcaccaaggacggcggcccgatcaagtacggctggaacatccgctccaacacc
aagcgctga
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