Pseudomonas protegens Pf-5: PFL_6093
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Entry
PFL_6093 CDS
T00249
Symbol
clpV
Name
(GenBank) type VI secretion ATPase ClpV
KO
K11907
type VI secretion system protein VasG
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02025
Biofilm formation - Pseudomonas aeruginosa
pfl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PFL_6093 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFL_6093 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfl02044
]
PFL_6093 (clpV)
Secretion system [BR:
pfl02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFL_6093 (clpV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Zeta_toxin
Sigma54_activat
AAA_25
TniB
nSTAND3
AAA_7
ATPase_2
NACHT
AAA_14
AAA_18
Torsin
Hpr_kinase_C
SRP54
NBD_SMAX1
CbiA
Motif
Other DBs
NCBI-ProteinID:
AAY95281
UniProt:
Q4K3N2
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All DBs
Position
6920216..6922891
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AA seq
891 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLTDSDLHRIIRQF
NLEPARLAKDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVIG
ILKTPSLRHALLGLSREFDKIKVETLCERFDEYIGDSPENALSASDGFSAGAVPGEASGA
MAPSALGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEQHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREQAIGVAIGNRQVNSENL
LTAERERLAELESRWAQEKTLVDELLATRAQLRENVGLVDSDVGDDSHGLREKLVDLQQR
LSTLQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHA
LQMIAKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSE
FQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDK
GVMEDGEGRMIDFKNTLILLTTNAGTELIANVCKNPQAVPEPEEIAKALRQPLLEIFPPA
LLGRLVTIPYYPLSDEMLKAITRLQLGRIKKRVESTHKVDFDFDDEVIDLIVSRCTETES
GGRMIDAILTNSLLPDMSREFLNRMLEGRALAGVRISQRDNELHYDFSEPA
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgcggcgctgttcggcaaactcaacagcgttgcctacaaagcc
atcgaagccgccacggtcttctgcaaattgcggggcaacccctatgtggaactggcccac
tggtttcaccagttgctgcaacttacggactcggacctgcaccgcatcatccgccagttc
aacctggagccggcgcgcctggccaaggacctgaccgaggccctggaccgcctgccccgg
ggctcgacctcgatcaccgacctgtcgtcccacgtcgaggaggcggtggagcgcggttgg
gtctacggcagcctgatgttcggcgaaagccaggtgcgcaccggctacctggtgatcggc
atcctcaagaccccgagcctgcgccatgcgttgctggggctgtcccgcgagttcgacaag
atcaaggtcgagaccctgtgcgagcgctttgacgaatacatcggcgactcgccggaaaac
gccctgagcgccagcgacggcttcagtgccggtgcggtgcccggcgaagccagcggcgcc
atggcccccagcgccctgggcaagcaggaagccctcaagcgcttcaccgtcgacctcacc
gaacaggcccgcagcggcaagctcgaccccatcgtcggccgtgacgaagagatccgccaa
ctggtggacatcctcatgcgccgccggcagaacaacccgatcctcaccggtgaagccggg
gtgggcaagaccgcggtggtggaaggtttcgccctgcgcatcgtcgccggcgacgtgccg
ccggcgctcaaggacgttgaactgcgcagcctcgacgtcggcctgctgcaggccggcgcc
agcatgaagggcgagttcgaacagcgcctgcgccaggtcatcgaggacgtccaggcctcg
cccaagccgatcatcctgttcatcgacgaagcccacaccctggtgggcgccggtggcgcc
gccggcaccggcgacgcggccaacctgctcaagccggctctggcccgtggtaccctgcgc
accgtggccgccaccacctgggccgagtacaagaagcacatcgagaaagacccggccctg
acccggcgcttccaggtggtgcaagtagccgaaccttcggaagacaaggcgctgctgatg
atgcgcggcgtggcctcgaccatggaacagcaccatcaggtgcagatcctcgacgaagcc
ctggaggcctcggtcaaactgtcccatcgctacattcccgcgcgccagttgccggacaaa
tccgtcagcctgctggataccgcttgcgcccgcgtcgccatcagcctgcacgccgtgccg
gccgaggtggacgatagccgccggcgcatcgaggccctggaaaccgagctgcagatcatc
gcccgggaacaggcgatcggcgttgccattggcaaccgccaggtcaacagcgagaacctc
ctgactgccgagcgcgagcgcctggccgagctggaaagtcgctgggcacaagagaagacc
ctggtggacgaactgctggcaacccgcgcccaattgcgggaaaacgtcggcttggtggac
agcgacgtcggcgacgacagccacggcctgcgggaaaaactggtggacctgcaacagcgc
ctcagcactctgcaaggcgagaccccgctgatcctgccgaccgtggactaccaggccgtg
gcctcggtggtcgccgactggaccggcattccagtggggcgcatggcccgcaacgagctg
gaaaccgtgctcaacctggaccagcacctgaagaaacgcatcatcggccaggaccacgcc
ctgcagatgatcgccaagcgcatccagacctcccgcgccggcctcgacaaccccaacaag
ccgatcggcgtgttcatgctggccggcacttccggggtgggcaagaccgaaaccgccctg
gccctggccgaagccatgtatggcggagagcagaacgtcatcaccatcaacatgagcgag
ttccaggaagcccacaccgtgtccaccctcaagggcgccccgccgggctatgtcggctac
ggcgaaggtggcgtgctcaccgaagcggtacggcgcaagccctacagcgtggtgctgctg
gacgaagtggaaaaggcccacccggacgtgcacgagatcttcttccaggtattcgacaag
ggcgtcatggaagacggcgaaggccgcatgatcgacttcaagaacaccctgatcctgctt
accaccaacgccggcaccgagctgatcgccaacgtctgcaagaacccgcaggcggtgccc
gagccggaggaaatcgccaaggccctgcgccagccactgctggagatcttcccgccggca
ctgctggggcgcctggtgaccattccctactacccgctgagcgacgagatgctcaaggcc
atcacccgcctgcaactggggcggatcaagaagcgcgtggaaagcacccacaaggtggat
ttcgatttcgacgacgaggtcatcgacctgatcgtctcgcgctgcaccgagaccgaaagc
ggcgggcggatgatcgacgccatcctgaccaacagcctgctgccggacatgagccgcgag
ttcctcaaccgcatgctcgaaggccgcgccctggccggggtgcgcatcagccagcgcgac
aacgaactgcactacgacttcagcgagccggcctga
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