Phytohabitans flavus: Pflav_034540
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Entry
Pflav_034540 CDS
T06516
Symbol
gyrB_1
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pfla
Phytohabitans flavus
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfla03032
]
Pflav_034540 (gyrB_1)
03400 DNA repair and recombination proteins [BR:
pfla03400
]
Pflav_034540 (gyrB_1)
Enzymes [BR:
pfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Pflav_034540 (gyrB_1)
DNA replication proteins [BR:
pfla03032
]
Prokaryotic type
DNA Topoisomerases
Pflav_034540 (gyrB_1)
DNA repair and recombination proteins [BR:
pfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pflav_034540 (gyrB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BCB77044
UniProt:
A0A6F8XT82
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All DBs
Position
complement(3768399..3770435)
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AA seq
678 aa
AA seq
DB search
MTETLYGADDLTHLEGLDAVRKRPGMYIGSTDSRGVNHLVNEILDNSTDEGVAGHATRVE
VILHDDGSVQVDDDGRGIPTDIHARSGLSGVELVLTRLHAGGKFGGSGYKTSGGLHGVGA
SAVNALARRFDVTVRRDGKVHEMSFRYGEPGVFDGPGPDAPFTPQSGLRVTGRLRAGKST
GTSIRYWHDPRYFETGAALDVEAARAKVRNTAFLVPNVTYVLTHAEGKDTYHFPNGLSDM
VEYLAPSGDRPVCGTVLINGSGSYRENAADENGVMQSNVERKAEVEVALRWGTGYERTVE
CFTNTIRNVHGGTHRKGFERATTRALVEAVRNTRGLLKPKEDPPVLDDVLEGMTAVVHVR
IPEPQFTSQTKDELSTAGITRVIQGVVEQQLRAWVDARKTKAEARTVLQKIVDAARVRLT
QKQQKDAARRKTALEGASMPAKLVDCRSTGVGRSELFIVEGDSALGTARMARSAEYQALL
PIRGKILNVQKANLQQVLDNAECSAIVQVLGAGSGRTFDLGTLRYGRILIMADADVDGSH
IRTLLITLFARYMRPVVEAGRLFAAMPPLHKVSTKGRDPKTIYTYTQAEMESTVAKLEKS
GKHVVTPVPRFKGLGEMDADELWDTTMNPATRSVRRITMQDVDAAERVLDLLMGDAVPPR
RAWLIDQAARVDRDAIDA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagaccctctatggcgcggacgacctcacgcacctcgagggtctcgatgccgtc
cgcaagcgcccaggtatgtacatcggctcgaccgacagccgcggcgtcaaccacctggtc
aacgagatcctcgacaactccaccgacgagggcgtggccggccacgccacccgggtcgag
gtgatcctgcacgacgacggctccgtgcaggtcgacgacgacgggcggggcatccccacc
gacatccacgcccgctccggcctgtccggcgtcgagctggtgctgacccggctgcacgcg
ggcggcaagttcggcggctccggctacaagacctccggcggcctgcacggcgtcggcgcc
tccgcggtcaacgcgctcgcccgccggttcgacgtcaccgtccgccgcgacggcaaggtc
cacgagatgtcgttccggtacggcgagcccggcgtcttcgacggcccgggcccggacgca
cccttcaccccgcagagcggcctgcgcgtgaccggccggctccgcgccggcaagagcacc
ggcacctccatccggtactggcacgacccgcgctacttcgagaccggcgcggccctggac
gtggaggcggcccgggcgaaggtgcgcaacaccgcgttcctcgtccccaacgtcacctac
gtgctgacccacgccgagggcaaggacacctaccactttcccaacgggctctccgacatg
gtggagtacctcgccccgtccggcgaccgcccggtctgcggcacagtcctgatcaacggc
tcagggtcgtaccgggagaacgccgccgacgaaaacggcgtgatgcagtccaatgtggag
cgcaaggccgaggtcgaggtcgcgctccgctgggggacaggctacgagcgcaccgtcgag
tgcttcaccaacacgatccgcaacgtgcacggcggtacccaccgcaaggggttcgagcgg
gccaccacccgcgcgcttgtcgaggcggtgcgcaacacccgcggcctcctcaagcccaag
gaggacccgcccgtcctcgacgacgtgctggagggcatgactgcggtcgtgcacgtgcgg
atccccgagccgcagttcacctcgcagaccaaggacgagctctccaccgccggcatcacg
cgcgtcatccagggcgtggtcgagcagcagctgcgggcgtgggtcgacgcgcgcaagacc
aaggccgaggcgcgcaccgtcctccagaagatcgtcgacgccgcccgcgtgcggctcacc
cagaagcagcagaaggacgccgcccgccgcaagaccgccctcgaaggcgcgtcgatgccg
gccaagcttgtcgactgccgctccaccggcgtcgggcgcagcgagctcttcatcgtcgag
ggtgacagcgcgctcggcaccgcccggatggcccgctcggcggagtaccaggcgctgctg
ccgatccgcggcaagatcctcaacgtgcagaaggccaacctccagcaggtgctcgacaac
gccgagtgctccgcgatcgtgcaggtgctcggcgccggctccggccgcacgttcgacctc
ggcaccctgcggtacggccggatcctgatcatggccgacgcggatgtcgacggctcgcac
atccgtaccctgctgatcacgctcttcgcccgctacatgcgcccggtcgtcgaagccggc
cgcctcttcgccgcgatgccgcccctgcacaaggtcagcaccaaggggcgcgacccgaag
accatctacacgtacacccaggcggagatggagagcacggtcgccaagctggaaaagtcc
ggcaagcacgtggtcacgccggtgccccggttcaagggcctcggcgagatggacgccgac
gagctgtgggacaccacgatgaacccggccacccgctccgtccgccgcatcaccatgcag
gacgtcgacgcggccgagcgggtgctcgacctgctgatgggcgacgcggtaccgccgcgc
cgcgcgtggctgatcgaccaggcggcgcgcgtcgaccgcgacgccatcgacgcgtga
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