Phytohabitans flavus: Pflav_045920
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Entry
Pflav_045920 CDS
T06516
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
pfla
Phytohabitans flavus
Pathway
pfla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pflav_045920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfla03400
]
Pflav_045920
Enzymes [BR:
pfla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
Pflav_045920
DNA repair and recombination proteins [BR:
pfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pflav_045920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BCB78182
UniProt:
A0A6F8XWE8
LinkDB
All DBs
Position
4960769..4961320
Genome browser
AA seq
183 aa
AA seq
DB search
MNGAGLDDVVAEGLTAVFVGINPGLASVALGHSFATPGNRLWPALYRAGFTPRLMRAEQE
RDLLPLGLGITSIVRRPTARAAQLSRQELVDGGRDLAERMRALRPGWLAMLGVSGYRLAF
DAKQAQIGPQSMTVGGARVWILPNPSGLNAHFPPAALAVEFARFRVAIGLPDRSGLLGDG
PFR
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggtgcgggactcgacgatgtggtcgccgaggggttgacggcggtgtttgtcggg
atcaaccccgggcttgcgtcagtggcgctggggcacagtttcgcgacgccgggcaacagg
ttgtggccggcgttgtaccgcgccgggttcacgccgcggctgatgcgcgcggagcaggag
cgggacctactgccgttagggctgggtatcacgagcatcgtgcgcaggcccaccgcacgt
gccgcacagctgtcgcggcaggagttggtggacggcggccgggatctggcggaaaggatg
cgggctctgcggccgggctggctggcgatgctgggagtgagcggataccgtctcgcgttc
gacgccaagcaggcgcagatcggcccgcaatcgatgacggtaggcggtgcccgcgtgtgg
attttacccaatcccagtgggctcaacgctcacttcccgccagcggcgctcgcggtcgag
ttcgccaggttccgggtggcaatcgggctaccggaccgctctggcctcctcggcgacggc
ccgtttcgctaa
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