KEGG   Phytohabitans flavus: Pflav_048560
Entry
Pflav_048560      CDS       T06516                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
pfla  Phytohabitans flavus
Pathway
pfla00040  Pentose and glucuronate interconversions
pfla01100  Metabolic pathways
pfla02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pfla00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    Pflav_048560
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pflav_048560
Enzymes [BR:pfla01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     Pflav_048560
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix F5_F8_type_C
Other DBs
NCBI-ProteinID: BCB78446
UniProt: A0A6F8XX80
LinkDB
Position
complement(5248194..5249756)
AA seq 520 aa
MRRAVALRLCAALGTTALVAATGVVLSIPEASAAVGGVTGYATQNGGTTGGAGGQTVRAT
TGTAIHAALCGRASSSTPIVIEVQGTINHGNTTKVSGDSCNTAADKIELKEISNVTIVGV
GGGAVFDQLGIHIRDASNIIIQNVTVRNVKKSGSPISNGGDAIGMESTVRNVWVDHVTLE
ASGGESEGFDGLFDMKDNTQYVTLSYSILRNSGRGGLIGSSESDRSNGFVTFHHNLYENI
DSRTPLLRGGIAHIYNNHYVSLHESGINSRAGARAKVDNNYFRNSKDVLGTFYTSEAGFW
QVSGNILDNVTWSSPGSDTNPAGPNPQSNTTVSIPYAYSLDGASCVPNVVSQTAGANKGL
QVSNGNCSPQTPPTTAAPSPTTPRPTTPAPTTPAPTQPSGTNLSLGAGADGSSKASGTSY
GNVLDGSMTTYWSPAGSTGSISIKWGSATSVSRINIREASGATGAIGSWRVVNADTGAVL
ASGSGAGVITFARTALRKITFEITSSSATPRVAEYETYAS
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgagacgagcagtcgcgctgcggctctgtgcggcgctgggcacgacggccctggtggcg
gcgaccggggtggtcctgtcgatacccgaggcgtcggcggctgtcggtggcgtcaccggc
tacgcgacgcagaacggcgggaccaccggcggtgcgggcgggcagaccgtgcgggccacg
accggcaccgcgatccacgcggccctgtgcggccgggccagcagcagcaccccgatcgtc
atcgaggtccaggggacgatcaaccacggcaacaccacgaaggtgtcgggcgacagctgc
aacacggccgccgacaagatcgagctcaaggagatcagcaacgtcacgatcgtcggggtc
gggggcggggccgtcttcgaccagttgggcatccacatccgggacgccagcaacatcatc
atccagaacgtgaccgtccggaacgtcaagaagtcgggctcgcccatctccaacggcggc
gacgccatcggcatggagagcaccgtccgcaacgtctgggtcgaccacgtcacgctcgag
gcgtcgggcggtgagtcggagggcttcgacggcctcttcgacatgaaggacaacacccag
tacgtgacgctgtcctacagcatcctgcgcaactccggccgcggcggcctcatcgggtcg
agcgagagcgaccgctcgaacgggtttgtcacgttccaccacaacctgtacgagaacatc
gactcacgcacgcccctgctgcgtggcggcattgcccacatctacaacaaccactacgtg
agcctgcacgagtccggcatcaactcccgcgccggtgcccgcgccaaggtggacaacaac
tacttccgcaactccaaggacgtcctcggcaccttctacacgagcgaggccggcttctgg
caggtcagcggcaacatcctcgacaacgtgacctggtccagcccgggcagcgacaccaac
ccggccggccccaacccgcagtccaacaccacggtcagcatcccgtacgcgtacagcctc
gacggggcgagctgcgtgccgaacgtcgtgagccagacggccggcgccaacaagggcctt
caggtgtcgaacggcaactgctcgccgcagacgccgccgaccaccgccgcgccgagcccg
accacgccgcgccccacgacgccggcgcccacgaccccggcaccgacccagcccagcggt
accaacctcagcctcggggccggcgccgacggctccagcaaggccagcggtacgagctac
ggcaacgtgctggatggaagcatgaccacgtactggtcgccggccggctcgacgggttcc
atctcgatcaagtggggctcggccacctcggtctccaggatcaacatccgggaggcgtcc
ggtgccaccggcgcgatcggatcgtggcgggtggtcaacgccgacaccggagcggtcctg
gcctcgggcagtggggcaggcgtgatcacgttcgcccggaccgcactgcgcaagatcacc
tttgagatcaccagctcgtccgcgacccccagggtcgccgagtacgagacctacgcgagc
tag

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