Phytohabitans flavus: Pflav_048560
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Entry
Pflav_048560 CDS
T06516
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pfla
Phytohabitans flavus
Pathway
pfla00040
Pentose and glucuronate interconversions
pfla01100
Metabolic pathways
pfla02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Pflav_048560
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pflav_048560
Enzymes [BR:
pfla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Pflav_048560
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
BCB78446
UniProt:
A0A6F8XX80
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Position
complement(5248194..5249756)
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AA seq
520 aa
AA seq
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MRRAVALRLCAALGTTALVAATGVVLSIPEASAAVGGVTGYATQNGGTTGGAGGQTVRAT
TGTAIHAALCGRASSSTPIVIEVQGTINHGNTTKVSGDSCNTAADKIELKEISNVTIVGV
GGGAVFDQLGIHIRDASNIIIQNVTVRNVKKSGSPISNGGDAIGMESTVRNVWVDHVTLE
ASGGESEGFDGLFDMKDNTQYVTLSYSILRNSGRGGLIGSSESDRSNGFVTFHHNLYENI
DSRTPLLRGGIAHIYNNHYVSLHESGINSRAGARAKVDNNYFRNSKDVLGTFYTSEAGFW
QVSGNILDNVTWSSPGSDTNPAGPNPQSNTTVSIPYAYSLDGASCVPNVVSQTAGANKGL
QVSNGNCSPQTPPTTAAPSPTTPRPTTPAPTTPAPTQPSGTNLSLGAGADGSSKASGTSY
GNVLDGSMTTYWSPAGSTGSISIKWGSATSVSRINIREASGATGAIGSWRVVNADTGAVL
ASGSGAGVITFARTALRKITFEITSSSATPRVAEYETYAS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagacgagcagtcgcgctgcggctctgtgcggcgctgggcacgacggccctggtggcg
gcgaccggggtggtcctgtcgatacccgaggcgtcggcggctgtcggtggcgtcaccggc
tacgcgacgcagaacggcgggaccaccggcggtgcgggcgggcagaccgtgcgggccacg
accggcaccgcgatccacgcggccctgtgcggccgggccagcagcagcaccccgatcgtc
atcgaggtccaggggacgatcaaccacggcaacaccacgaaggtgtcgggcgacagctgc
aacacggccgccgacaagatcgagctcaaggagatcagcaacgtcacgatcgtcggggtc
gggggcggggccgtcttcgaccagttgggcatccacatccgggacgccagcaacatcatc
atccagaacgtgaccgtccggaacgtcaagaagtcgggctcgcccatctccaacggcggc
gacgccatcggcatggagagcaccgtccgcaacgtctgggtcgaccacgtcacgctcgag
gcgtcgggcggtgagtcggagggcttcgacggcctcttcgacatgaaggacaacacccag
tacgtgacgctgtcctacagcatcctgcgcaactccggccgcggcggcctcatcgggtcg
agcgagagcgaccgctcgaacgggtttgtcacgttccaccacaacctgtacgagaacatc
gactcacgcacgcccctgctgcgtggcggcattgcccacatctacaacaaccactacgtg
agcctgcacgagtccggcatcaactcccgcgccggtgcccgcgccaaggtggacaacaac
tacttccgcaactccaaggacgtcctcggcaccttctacacgagcgaggccggcttctgg
caggtcagcggcaacatcctcgacaacgtgacctggtccagcccgggcagcgacaccaac
ccggccggccccaacccgcagtccaacaccacggtcagcatcccgtacgcgtacagcctc
gacggggcgagctgcgtgccgaacgtcgtgagccagacggccggcgccaacaagggcctt
caggtgtcgaacggcaactgctcgccgcagacgccgccgaccaccgccgcgccgagcccg
accacgccgcgccccacgacgccggcgcccacgaccccggcaccgacccagcccagcggt
accaacctcagcctcggggccggcgccgacggctccagcaaggccagcggtacgagctac
ggcaacgtgctggatggaagcatgaccacgtactggtcgccggccggctcgacgggttcc
atctcgatcaagtggggctcggccacctcggtctccaggatcaacatccgggaggcgtcc
ggtgccaccggcgcgatcggatcgtggcgggtggtcaacgccgacaccggagcggtcctg
gcctcgggcagtggggcaggcgtgatcacgttcgcccggaccgcactgcgcaagatcacc
tttgagatcaccagctcgtccgcgacccccagggtcgccgagtacgagacctacgcgagc
tag
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