Phytohabitans flavus: Pflav_050640
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Entry
Pflav_050640 CDS
T06516
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pfla
Phytohabitans flavus
Pathway
pfla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pflav_050640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfla03000
]
Pflav_050640
03400 DNA repair and recombination proteins [BR:
pfla03400
]
Pflav_050640
Enzymes [BR:
pfla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Pflav_050640
Transcription factors [BR:
pfla03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Pflav_050640
DNA repair and recombination proteins [BR:
pfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pflav_050640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HTH_18
Ada_Zn_binding
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
BCB78654
UniProt:
A0A6F8XXS4
LinkDB
All DBs
Position
complement(5464059..5465399)
Genome browser
AA seq
446 aa
AA seq
DB search
MTTYSAVVTTGIYCRPGCGARPRAENVRTFELAAAAEAAGFRACLRCRPYRIAGELPWDA
PELVCRAVQLIIGGALDEGTEADLGRRLGMSSRHLRRLFHEHLGVTPDQFARSRRAHFAR
RMLDDTDLTVADVAFASGFGSLRQFNRTMREVFRATPQALRERRRRADRLTADGGLGLRL
PVEPPYDWDATLAFLAGGAIPGVEAVDGGTYRRTITLDGGPGLLEIWRGGHDHLLLRAHL
PYWEGLIHVVERVRRMLGLDVDFAATGHLAGDPIVGPLLKERPGLRVPGAWGPFEAGVAA
IARQHHDTAGARELLGRLARDHGPVVPGLDGGLDRVFPAAEVVASAAGVPDPVRRFAAAV
GAGEIRLDGTDDLAGLVASLTAIPGIGDAAAHHLAMRLGERDAFPAGDPALVAALGPDAV
AVAQAWRPWRALAATHLLADELPRPL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtactccgccgtggtcacgaccggcatctactgccggccgggctgcggtgcg
cggccgcgcgcggagaacgtccgcacgttcgagctggccgccgccgcggaggcggccggc
tttcgcgcgtgcttgcgctgccgcccctaccgcatcgccggtgagctgccctgggacgcg
cccgagctggtctgccgcgcggtgcagctcatcatcggcggggcgctcgacgagggcacc
gaggcggatctcgggcggcggctcggcatgtccagccggcacctgcggcgcctgttccac
gagcacctcggcgtgacgcccgaccagttcgcccgttcgcggcgggcgcacttcgcgcgg
cggatgctggacgacaccgacctgacggtggcggacgtggcgttcgcgtcggggttcggg
agcctgcggcagttcaaccgcaccatgcgcgaggtcttccgggccacgccccaggccctg
cgtgagcggcggcggcgcgcggaccggctgaccgccgacggtgggctggggctgcggctg
ccggtagagccgccgtacgactgggacgcgacgctcgcgttcctcgccggcggggcgatc
ccgggcgtcgaggccgtcgacggcggcacctaccgccgcaccatcacgctcgacggcggg
ccgggcctgctcgagatctggcggggcggccacgaccacctgctgctccgcgcccacctg
ccctactgggaggggcttatccacgtcgtcgaacgcgtgcggcgcatgctcggcctcgat
gtcgacttcgccgccaccggccacctggccggcgacccgatcgtcgggccgctgctcaag
gagcggccggggctgcgggtgcccggcgcgtggggacccttcgaggcgggcgtcgcggcg
atcgcccgccagcaccacgacaccgccggggcgcgcgagctgctcggccggctggcgcgg
gaccacgggccggtggtgcccggcctcgacggtggcctggaccgcgtgtttcccgccgcc
gaggtcgtcgcgtcggccgccggtgtgcccgacccggtccgccgcttcgccgcggcggtc
ggcgccggcgagatccgcctggacggcaccgacgacctggccggcctcgtcgcgtcgctg
accgccatcccgggtatcggcgacgcggccgcccaccacctcgcgatgcggcttggggag
cgggacgcgtttccggctggcgacccggcgctggtggcggccctgggcccggacgcggtg
gcggtcgcgcaggcgtggcggccctggcgcgcgctcgccgccacccacctgctcgccgac
gagttgccccggccgctctga
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integrated database retrieval system
