Phytohabitans flavus: Pflav_051480
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Entry
Pflav_051480 CDS
T06516
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pfla
Phytohabitans flavus
Pathway
pfla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pflav_051480 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfla03019
]
Pflav_051480 (recQ_2)
03400 DNA repair and recombination proteins [BR:
pfla03400
]
Pflav_051480 (recQ_2)
Enzymes [BR:
pfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pflav_051480 (recQ_2)
Messenger RNA biogenesis [BR:
pfla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pflav_051480 (recQ_2)
DNA repair and recombination proteins [BR:
pfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pflav_051480 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
Glycos_transf_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCB78738
UniProt:
A0A6F8XYD7
LinkDB
All DBs
Position
5550338..5551849
Genome browser
AA seq
503 aa
AA seq
DB search
MAPAVDLETEALRVLRRVFGYDAFRGDQREIIEHVVGGGDALVLMPTGGGKSLCYQIPAL
VREGTAVVVSPLIALMQDQVDALRALGVRADFLNSTLDFDTRRAVEATFLAGDLDLLYLA
PEALGTPGVQRLLDRGNIALFAIDEAHCVSQWGHDFRPDYLALSMLHERWPDVPRIALTA
TATTATHAEIAKRLQLEGARHFVASFDRPNIQYRIVPKNEPRKQLLHLLRTEHAGDAGIV
YCLSRASVEKIAEFLVANGVTALPYHAGLDARTRATNQSRFLREDGLVMVATIAFGMGID
KPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQLRKLIDGSEGDLAH
RRNLAAHLDAMLALCETVECRRVQLLAYFGQEGSPCGNCDTCLAPPESWDGTVAAQKLLS
TVLRLHRERGQHFGATQSIDILLGKKTDKVTQHRHDQLTVFGIGTELSESEWRAVVRQLL
AQGLLAVEGEYGTLALTEGSKGY
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtggctcccgcagtagatcttgagaccgaggcgctccgcgtcctccgccgggtcttcgga
tacgacgcgttccggggtgaccagcgcgagatcatcgagcatgtggtcgggggcggcgac
gcgctcgtcctcatgcccaccggcggcggcaagtcgctctgctaccagatccccgccctg
gtccgcgagggcaccgcggtggtggtctccccgctgatcgcgctcatgcaggaccaggtc
gacgcgctgcgggcgctcggggtgcgggccgacttcctcaactcgacgctcgacttcgac
acccgccgggcggtcgaggcgaccttcctcgcgggcgacctcgacctgctctacctggcc
cccgaggcgctcggcacgcccggcgtgcagcggctgctcgaccgcggaaacattgcgctc
ttcgcgatcgacgaggcgcactgcgtgtcgcagtggggccacgacttccgccccgactac
ctcgcgctgtcgatgctgcacgagcgctggccggatgtgccgcgcatcgcgctcaccgcc
accgccaccacggccacacacgcggagatcgccaagcggctccagctcgagggtgcacgc
cacttcgtggcgagcttcgaccggcccaacatccagtaccggatcgttcccaagaacgag
ccgcgcaagcagttgctccacctgctgcgcaccgagcacgcgggcgacgccggcatcgtg
tactgcctgtcccgcgcttcggtggagaagatcgccgagttccttgtcgcgaacggcgtc
accgccctgccgtaccacgccgggctcgacgcgcgcacccgcgccaccaaccagtctcgc
ttcctgcgcgaagacgggctggtcatggtcgccacgatcgcgttcggcatgggcatcgac
aagcccgacgtgcgcttcgtcgcccacctcgacctgcccaagtcggtggaggggtattac
caggagaccggccgcgccgggcgcgacggcctcccctcgaccgcctggctggcgtatggg
ttgcaggacgtcgtgcagctccgcaagctgatcgacggctcagagggcgacctggcccac
cggcgcaacctcgccgcccatctcgacgcgatgctggccctgtgcgagaccgtcgagtgc
cggcgggtgcagctgctcgcgtatttcgggcaggagggcagcccgtgtggcaactgcgac
acatgcctcgcgccgccggagtcgtgggacggcacggtcgccgcgcagaagctgctttcc
accgtgctgcggctgcaccgcgagcggggccagcacttcggcgccacccagtcgatcgac
atcctgctcggcaagaagaccgacaaggtcacgcagcaccgccacgaccagctcaccgtc
ttcggcatcggcaccgagctgagcgagagcgagtggcgggcggtggtgcgccagctcctg
gcccaggggctgctcgcggtcgaaggtgagtacggcacgctcgcgctcaccgagggcagc
aaggggtactga
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