Phytohabitans flavus: Pflav_053220
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Entry
Pflav_053220 CDS
T06516
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfla
Phytohabitans flavus
Pathway
pfla03030
DNA replication
pfla03430
Mismatch repair
pfla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pflav_053220 (dnaQ)
03430 Mismatch repair
Pflav_053220 (dnaQ)
03440 Homologous recombination
Pflav_053220 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfla03032
]
Pflav_053220 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pfla03400
]
Pflav_053220 (dnaQ)
Enzymes [BR:
pfla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pflav_053220 (dnaQ)
DNA replication proteins [BR:
pfla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pflav_053220 (dnaQ)
DNA repair and recombination proteins [BR:
pfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pflav_053220 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
UVR
Motif
Other DBs
NCBI-ProteinID:
BCB78912
UniProt:
A0A6F8XYH0
LinkDB
All DBs
Position
5725016..5726779
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AA seq
587 aa
AA seq
DB search
MSYLCSTVPRVTNVDYVQGTLDTLLDDPAALSLRETTFVVVDLETTGGAPDGGGITEIGA
VKVRGGEELGVLATLVNPGVPIPPFITVLTGITQAMTFEAPPIERVLPSFLEFMRDAVLV
AHNASYDVGFLKAACAKHGYRWPNPKVLDTVALARRAMTRDEVPNHRLGTLAAHFHTVRQ
PTHRALDDAQATVEVLHALIGRLGSFRVHTVGDAIEFAKAVTPTQRRKRHLAEGLPHVPG
VYIFRAGDGRPLYVGTSGDIATRVRSYFTAGEKRARISEMLAAAETVEPVECAHSLEAEV
RELRLIAAHAPPYNRRSKYPERVVWLKLTAEAYPRLSLVRAVAEPEAAYLGPFSSRRSAE
LAAAGVHDAVPLRQCTLRLSTRTKTAACALAELGKCPAPCEHRISTAEYLERAAMPFRDA
ITGDPGPLVDPLLARIRKLSEAQRYEEAAVVRTRMAALLRATVRMQRLSGVTGIAELVAA
RRHRSTGGWELAIVRHGRLAAAGVSPRGCTHGPRSTCSGSPPRPWSSPPRPLRRASGFCP
GWSGRTPVWCKCPLVGRHPSEGQRAFVIFSFAPKRRLPVKTRPKAHE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacctgtgttctaccgtgccgcgcgtgacgaatgtggactacgtgcagggcacg
ctcgacaccctgctcgacgatcccgccgccctctccctgcgcgagaccacgttcgtcgtc
gtcgacctggagaccaccggcggggcgccggacggtggcggcatcaccgagatcggcgcc
gtcaaggtgcgcggtggcgaggagctgggcgtgctcgccacgctggtcaacccgggggtg
ccgatcccgccgttcatcaccgtgctgaccggcatcacccaggcgatgaccttcgaggcg
ccgccgatcgagcgggtgctgcccagcttcctggagttcatgcgggatgccgtgcttgtc
gcgcacaacgcgtcgtatgacgtgggcttcctcaaggcggcctgcgccaagcacggctac
cgctggcccaaccccaaggtgctcgacacggtcgcgctggccaggcgggcgatgacccgc
gacgaggtgcccaaccaccggctcggcacgctggccgcccacttccacaccgtccgccag
cccacccaccgggcgctcgacgacgcgcaggccacggtggaggtgctgcacgcgctgatc
ggccggttgggcagcttccgggtgcacacggtgggcgacgcgatcgagttcgccaaggcg
gtcacccccactcagcggcgcaagcgtcacctggccgagggactgccgcacgtcccgggg
gtgtatatctttcgggccggcgacggccgccccctctacgtcggcacgtccggcgacatc
gcgacccgggtgcgcagctacttcaccgctggcgagaagcgggcccggatctccgagatg
ctggccgcggccgagacggtggagccggtcgagtgcgcccactcgctggaggctgaggtc
cgcgagctgcgcctgatcgccgcgcacgccccgccgtacaaccggcggtccaagtacccc
gagcgggtcgtctggctgaagctcaccgcggaggcctacccccgcctgtccctggtccgc
gcggtggccgagccggaggcggcgtacctcggaccattcagctcgcggcgctcggccgag
cttgccgcggccggggtgcacgacgcggtgccgctgcggcagtgcacgctgcgcctctcg
acgcgcaccaagacggccgcctgcgcgctggccgagttgggcaagtgccccgcgccgtgc
gagcaccggatctccacagcggagtacctggagcgggccgccatgccattccgggacgcg
atcacgggcgaccccgggccgctcgtcgacccgctgctggcgcgtatccgcaagctttcc
gaagctcagcggtacgaggaggcggccgtggtccgtacccgcatggcggccctgctcagg
gcgaccgtgcgcatgcagcgcctctccggggtgaccggcatcgccgagctcgtcgcggcc
cgccgccacaggtcgaccggtgggtgggagctggcgatagtgcggcacgggcggctcgcc
gcggccggcgtgtcaccccgcgggtgcacccacggtccacgatcgacatgctccggctca
ccgccgagaccgtggtcgagcccaccgcgtccactgaggagagcgagcggattctgtcct
ggctggagcggccggacacccgtctggtgcaaatgtccgctggttgggcgtcacccgtcc
gaggggcagcgcgccttcgtgatcttctcattcgcgccgaaaaggcggcttccggtaaag
actcgaccgaaagctcatgagtaa
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