Phytohabitans flavus: Pflav_062700
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Entry
Pflav_062700 CDS
T06516
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfla
Phytohabitans flavus
Pathway
pfla03420
Nucleotide excision repair
pfla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pflav_062700
03430 Mismatch repair
Pflav_062700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfla03400
]
Pflav_062700
Enzymes [BR:
pfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pflav_062700
DNA repair and recombination proteins [BR:
pfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pflav_062700
MMR (mismatch excision repair)
Other MMR factors
Pflav_062700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BCB79860
UniProt:
A0A6F8Y1C2
LinkDB
All DBs
Position
complement(6788419..6791715)
Genome browser
AA seq
1098 aa
AA seq
DB search
MIELFPVTPRAAAGPRYTPHELASMLHLHPPTPEQAAIISAPVEPLLVVAGAGSGKTETM
AARVLWLVANGYASPEQVLGLTFTRKAAGELAHRVRTRLGQLVRRLGREELLAGEPTVAT
YHSYAARVMVEHGLRAGYEPSARLLTEASRWQIVDLLVRNYNGDMSDVPFAPSTVTDAVL
QLASELSEHLVSTDELAAWTGRFFAEIQARPGKVAAPVRDALARQQVRLKLLPLVRAYEA
RKNDFEAMDFGDQMARAALVARDHPEVGIIERERYKVVLLDEYQDTSHAQVVLLRSLFAG
GGADKLSGQGHPVAAVGDPCQSIYGWRGASAGTLERFSTEFGGAERSLTTSWRNRPEVLG
VANALSTPLRAAGARVAELTAAARVGARIGGAAVHCALLESFAAEAEWIADSMLKAWRSA
AGLPEALAEQIPVEQRPTSAVLVRLRSQIPAIEAALRARGVPVEVVGLGGLLDTAEVRDV
VCTLRVLADPTDGASLLRLLTGARWRIGPRDLVAVYRRSRAIAAARRGLAPVPDEPEIVP
DRLDESSLVEALADLGPPQSYSAEGYARLRTYGRELALLRHRLDQPLPDLIADVERTAGL
DVEVAVRAGADAGLARGHLDALGDVAARFARDTDGGTLGGFLAFLAAAEDEERGLSPGEV
DVVEGAVQILTAHAAKGLEWDVVAVAGLTKGVWPGPVRASDHYLKGLGVLPFPLRGDADG
LPRLALEEAADQRAVAAAVEAFNEEWAGHDEREERRLAYVAVTRPRRLLLCSGYWWGEGV
KKARGPSVFLTEIRDQCLAGSGVVVAWEPEPAPDVANPTAEVVATAEWPSDPLGPRRPAM
TEAAAMVRKLMSDLVEDAAPDSETGLDPPAQGWAHEVDMLLAERDRLARRDEPTEIALPG
HLSVSQLVTLRRDPQGLARQLRRPMPSRPDPYSRRGTAFHLWLEQRFGASRLLDVDELPG
AADEDAAPDEALAELQERFLASEWADRTPVEVEAPFATVIAGVVVRGRMDAIFADPGGRY
DVVDWKTGRQPSGVEAQAAAVQLAAYRLAWAELAGVPVEHVRAAFHYVREGVTVRPADLL
DAAGLAALVNSVPVGEAP
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgagctgttcccggtcaccccgcgcgcggccgccggcccccggtacacgccgcac
gagctggcgtcgatgctgcacctgcacccgccgacgccggagcaggcggcgatcatctcg
gcgccggtggagccgctgctcgtggtcgccggcgccggctcgggcaagacggagacgatg
gccgcccgggtgctgtggctggtggcaaatgggtatgcgagccccgagcaggtgctcggc
ctcacgttcacccggaaggcggccggcgagctggcccaccgcgtgcgcacgcgcctgggg
cagctcgtgcgccggctcggccgtgaggagctgctggccggcgagcccacggtggccacc
taccattcgtacgcggcccgggtgatggtcgagcatgggctgcgcgccggctacgagccg
tccgcgcggctgctcaccgaggcgtcccgctggcagatcgtcgacctgctcgtccgcaac
tacaacggcgacatgtccgacgtacccttcgcgccgtccactgtgaccgacgcggtgtta
cagctcgccagcgagctgtccgagcacctggtctcgaccgacgagctggccgcgtggacc
ggacgcttcttcgccgagatccaggcgcggccgggcaaggtggccgccccggtgcgcgac
gcgctcgcccgccagcaggtgcggctcaagctgctgccgctcgtccgggcgtacgaggcg
cgtaagaacgacttcgaggcgatggacttcggcgaccagatggcccgcgccgcgctggtc
gcccgcgaccaccccgaggtcggcatcatcgagcgggagcgctacaaggtggtgctgctc
gacgagtaccaggacacgagccacgcccaggtggtgctgctccggagccttttcgccggc
ggcggggcagacaagctcagcgggcaggggcacccggtggccgcggtcggcgacccgtgc
cagtccatctacgggtggcgcggggccagcgcgggcacattggagcggttctcgacggag
ttcggcggggcggagcggtcgctcaccacgagctggcgcaaccggcccgaggtgctcggc
gtggccaatgcgctctccacgccactgcgcgcggcgggcgctcgggtggcggagctgacc
gcggcggcccgggtgggcgcgcggatcggcggcgcggccgtccactgtgcactgctggag
tcgttcgcggccgaggcggagtggatcgcggacagcatgctcaaggcgtggcgctcggcc
gcgggcctgcccgaggcgctggccgagcagatcccggtcgagcagcgcccgacgagcgcc
gtgctcgtacggctgcgcagccagatcccggcgatcgaggcggcgctgcgggcgcgcggg
gtgccggtcgaggtggtcggcctcggtgggctcctggacaccgccgaggtgcgcgacgtg
gtgtgcacgctgcgggtgctcgccgatcccaccgacggcgcctcactgctgcggctgctg
accggtgcgcgctggcggatcgggccgcgcgacctcgtcgccgtgtaccgccgctcgcgg
gccatcgcggccgctcgccgtggcttggcgccggtgccggacgagccggagatcgtgcct
gaccgcctcgacgagtcgagtctcgtcgaggcgctggccgacctcgggccaccacagtct
tactccgcggaggggtatgcccgcctccgtacgtacggccgcgagctcgcccttctccgc
caccggctcgaccagccgctgcccgacctgatcgcggacgtcgagcgcaccgctggcctc
gacgtcgaggtggccgtgcgcgccggagccgacgccggcctggcccggggccacctcgac
gcgctcggcgacgtcgcggcccgcttcgcccgggacacggacggcggcacgctgggcggc
ttcctggccttcctggccgcggccgaggacgaggagcgcggcctgtcgccgggtgaggtc
gacgtggtcgagggcgcggtacagatcctcaccgcgcacgcggcaaaagggctggagtgg
gacgtcgtggcggtcgcggggctgaccaagggggtgtggccggggccggtgcgcgcctcc
gaccactacctcaaggggctcggcgtgctgcctttcccgctgcgcggcgacgccgacggg
ctgccccggctcgcgctggaggaggcggccgaccagcgcgcggtggccgccgcggtcgag
gcgttcaacgaggagtgggcagggcacgacgagcgcgaggagcggcggctggcgtatgtt
gcggtcacccgcccccggcgcctgctgctctgctccgggtactggtggggcgagggggtg
aagaaggcgcgcggcccgtcggtcttcctcaccgagatccgcgaccagtgcctggccggc
agcggggtggtggtggcgtgggagcccgagccggcgcccgacgtggccaacccgaccgcc
gaggtggtcgcgacggcggagtggccctcggatccgctcggcccccgtcgtccggcgatg
accgaggcggcggcgatggtgcggaagctgatgtcggacctcgtcgaggacgccgcgcct
gattcggagaccggcctggatccgccggcccaggggtgggcgcacgaggtcgacatgctg
ctggccgagcgcgaccgactggcccggcgcgacgagccgaccgagatcgcgctgcccggc
cacctctcggtctcgcagctcgtgacgctccgccgcgacccgcaggggctggcccggcag
ctgcgccgcccgatgccctcgcgccccgacccgtactcgcgccggggcaccgccttccac
ctctggctggagcagcgcttcggcgcgagccgcctgctcgacgtcgacgagctgcccggc
gccgcggacgaggacgcggcgccggacgaggcgctggccgagctacaggagcgatttctg
gcgagcgagtgggccgatcgcacgccggtcgaggtggaagccccattcgctaccgttatc
gccggcgtggtcgtgcgcgggcggatggacgcgatcttcgccgacccgggcgggcgctac
gacgtggtggactggaagaccggccgccaaccgtccggtgtggaggctcaggcggcggcg
gtgcagttggcggcataccgcctggcgtgggccgagctggccggggtgccggtcgaacat
gtgcgggccgcctttcactatgtccgcgagggggtgacggtgcgcccagcagacctgctc
gacgcggctgggctggccgcgctggtcaactccgtgcccgtgggggaggcaccgtga
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