Phytohabitans flavus: Pflav_071070
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Entry
Pflav_071070 CDS
T06516
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pfla
Phytohabitans flavus
Pathway
pfla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pflav_071070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfla03400
]
Pflav_071070
Enzymes [BR:
pfla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Pflav_071070
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Pflav_071070
DNA repair and recombination proteins [BR:
pfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pflav_071070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_ribbon_RRN7
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
BCB80697
UniProt:
A0A6F8Y3R7
LinkDB
All DBs
Position
complement(7621767..7622639)
Genome browser
AA seq
290 aa
AA seq
DB search
MPELPEVEALAAYLRERAAGRRVDRIEVVALSALKTYDPPPTAAAGLEITGAGRYGKFLD
VHIGEASNTDLHLVVHLSRAGWLHYRDSFNSGAPLKPGKGPIALRVRLDDGSGFDLTEAG
TKKSLAAYLVKDPALVPGISRLGPDALAADEATFAERIRGRKGQLKGVLTAQEVLAGVGN
AYSDEILHAAKLSPFAITTRLTDEQMARLHAAVREILTDAVTRSVGQRAAELKGEKRSGL
RVHARTGLPCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRLSRLVR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaggtggaggcgctcgccgcgtaccttcgcgagcgggccgctgga
cggcgcgtggaccgcatcgaggtcgtcgcgctcagcgccctcaagacgtacgacccgccg
ccgaccgcggccgccggactggagatcaccggcgccggccggtacggcaagttcctcgac
gtccacatcggcgaggcgtccaacaccgacctgcacctggtcgtgcatctctcgcgcgcc
ggctggctgcactaccgcgactcgttcaacagcggcgcgccgctcaagccgggcaagggt
ccgatcgcgctgcgcgtgcggctcgacgacggctccggcttcgacctcaccgaggcgggc
accaagaagagcctcgccgcctacctcgtgaaggacccggcgctggtgccgggcatctcc
cggctcgggccggacgcgctggccgccgacgaggccacgttcgccgagcgcatccgcggc
cgcaaaggacagctcaagggggtgctgaccgcccaggaggtactggccggggtgggcaac
gcctactcggacgagatcctgcacgcggcgaagctctccccgttcgcgatcacgacccgg
ctgaccgacgagcagatggcccggctacacgcggcggtccgggagatcctgaccgacgcg
gtgacccgctcggtgggccagcgcgccgccgagctcaagggcgagaagcgctcgggtctg
cgggtgcacgcgcgcaccgggctgccctgcccggtatgtggcgacacggtccgggaggtg
tcgttcgccgactccagcctccagtactgcccaacctgtcagaccggcgggaagccactc
gccgatcgcagactgtcacggctcgtgcgctag
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