Phytohabitans flavus: Pflav_075110
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Entry
Pflav_075110 CDS
T06516
Symbol
topA_2
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pfla
Phytohabitans flavus
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfla03032
]
Pflav_075110 (topA_2)
03400 DNA repair and recombination proteins [BR:
pfla03400
]
Pflav_075110 (topA_2)
Enzymes [BR:
pfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Pflav_075110 (topA_2)
DNA replication proteins [BR:
pfla03032
]
Prokaryotic type
DNA Topoisomerases
Pflav_075110 (topA_2)
DNA repair and recombination proteins [BR:
pfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pflav_075110 (topA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MarR_2
Toprim_2
HC2
Motif
Other DBs
NCBI-ProteinID:
BCB81101
UniProt:
A0A6F8Y568
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All DBs
Position
8013158..8015962
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AA seq
934 aa
AA seq
DB search
MPSNASSRLVIVESPAKAKTISGYLGPGYVVEASLGHVRDLPRNAADVPASHKKEPWARL
GVDVDNGFAALYVVSPDRKEQIRKLRSLVKEVDEVFLATDEDREGEAIAWHLVETLKPKV
PVRRMVFHEITRSAIQAAIASPRDIDRDLVDAQEARRILDRLYGYEVSPVLWKKVMPRLS
AGRVQSVATRIVVERERHRMAFRTAEYWDVAATLAVQGKVEGPRTFGATLIALDGDRIAT
GKDFEPTTGQVKPGAGVVHLDADGARGLAARLDGRPFTVTRVEEKPYRRRPYAPFITSTL
QQEAARKLRLSSQQTMRVAQRLYENGYITYMRTDSVNLSETALAAARRQIAELYGERNVP
PEPRRYTGKVKNAQEAHEAIRPAGDNFRTPGEVAKELSTEEFKLYELIWRRTIASQMTDA
VGSSVSVRIRAISTSGEEADFGATGKTITDPGFLRAYVESSDDENAEAEDQERRLPNLVK
DQPLTAEELAAVGHTTQPPARYTEASLVKQLEELGIGRPSTYASIMATIQDRGYVFKRGQ
ALIPSFLAFAVVGLLEQHYPRLVDYNFTAAMENELDEIAAGDAHSTDFLTSFYFGSPVGD
DGSIARSGGLKKMVTENLGDIDARSVNSIPLFRDDEGRDVVVRVGRYGPYLQRTLPDAEP
AADGGDDRVSIPEGLAPDELTPEKVEELYLGGSGERKLGEHPETGEPVVLKSGRYGPYVS
TGDRNASLLRSQSPETVTLEEALKLLTLPRLVGTDPEGKEILAAAGRYGPYVKRDDDYRS
LDSEDKIFTVTLDEALALLAAPKTRQRRAAAEPLRELGVDPLTEKQMTIKNGRFGPYVTD
GETNASLRRDQTPESLTVEQASEMLAERRARGPAKPRKKAAAAKKTTAAADGAAPAKKTA
AKKTAAAKKTTAKKTTTAAKKAAPKKAAARKSSE
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagcaacgccagcagccgtctggtcatcgtcgagtcaccggcgaaggccaagacg
atctcgggttacctcggcccgggatacgtcgtggaggcgagcctgggccacgtgcgtgac
cttccgcgtaacgccgccgacgtgccggcttcgcacaagaaggagccctgggcccggctc
ggcgtcgacgtcgacaacgggttcgccgccctgtacgtcgtatctcccgaccggaaggaa
cagatccgcaagcttcgctcgctggtcaaggaggtcgacgaggtcttcctcgccaccgat
gaggaccgcgagggcgaggccatcgcctggcacctggtggagacgctgaagcccaaggtg
ccggtccgccggatggtcttccacgagatcaccaggtcggccatccaggccgcgatcgcg
agcccgcgcgacatcgaccgcgatcttgtcgacgcgcaggaggcccgccgcatcctggat
cgcctctacgggtacgaggtgtcgcccgtcctgtggaagaaggtcatgccccggctctcg
gccggccgggtgcagtcggtcgccacccgcatcgtggtggagcgcgagcggcatcggatg
gcgttccgcaccgccgagtactgggacgtggccgccacgcttgccgtacagggcaaggtt
gagggccctcgcacgttcggggcgacactgatcgcgctcgacggcgaccgcatcgcgacc
ggcaaggacttcgagccgacgacggggcaggtgaagcccggcgccggggtcgtgcacctc
gatgccgacggcgcccgtggcctggccgctcgcctcgacgggcggccattcactgtcacc
cgtgtggaggaaaagccgtaccggcggaggccgtacgcgccgttcatcacctccaccctc
cagcaggaggccgcacgcaagctgcgcctctcctcgcagcagacgatgcgggtcgcgcag
cggctgtacgaaaatggctacatcacctatatgcgtaccgactcggtcaacctctcggag
accgccctcgcggctgctcgccggcagatcgccgagctctacggcgagcgcaacgtgcca
ccggagccccgccgctacaccggcaaggtcaagaacgcgcaggaggcgcacgaggcgatc
cgccccgcgggtgacaacttccgcacgccgggcgaggtggccaaggagctgtcgaccgag
gagttcaagctctacgagctgatctggcggcgcacgatcgcgtcccagatgaccgacgcg
gtcggctcgtccgtctcggtgcgcatccgcgccatctcgacctcgggcgaggaggctgac
ttcggggcgaccggtaagacgatcaccgacccgggcttcctgcgcgcgtacgtcgagtcc
tccgacgacgagaatgccgaggccgaggaccaggagcggcggctgcccaacctggtcaag
gaccagccgctcaccgccgaggagctggccgcggtcgggcacacgacccagccgccggcg
cgctacaccgaggcttcgctggtcaagcagcttgaggagctgggcatcgggcgcccgtcg
acgtacgcgtcgatcatggcgacgatccaggaccgggggtacgtcttcaagcgcggacag
gcgctgatcccgtccttcctcgcgttcgcggtggtggggctgctggagcagcactacccg
cggctcgtcgactacaacttcacggccgcgatggaaaacgagctggacgagatcgcggcc
ggtgacgcccactcgaccgacttcctgacctcgttctacttcggctcgccggtcggcgac
gacggttcgatcgcccgctccggtggcctgaaaaagatggtcaccgaaaacctcggcgac
atcgacgcgcgcagcgtcaactccatcccgctcttccgcgacgacgaggggcgtgacgtc
gtcgtccgggtcggccgctacgggccgtacctccagcgcaccctgcccgacgccgagccg
gctgcggacgggggcgacgaccgtgtctccatccccgaagggctggcgcccgacgagctg
accccggagaaggtcgaggagctctacctcggcggcagcggggagcgaaagctgggcgag
cacccggagaccggcgagccggtggtgctcaagtccggccgctacggcccgtacgtctcc
accggcgaccgcaacgcatcgctgctgcgctcgcagtccccggagacggtgacgctcgaa
gaggcgttgaagctgctcacgctgccccgcctggtcggcaccgacccggagggcaaggag
atcctggcggcagcgggccgctacgggccgtacgtcaagcgcgacgacgactaccgctcg
ctcgactccgaagacaagatcttcacggtcacgctcgacgaggcgctggcgctgctggcc
gcaccgaagacccgccagcgccgggctgccgccgagccgctgcgcgagctgggtgtcgac
ccgctcaccgaaaagcagatgaccatcaagaacgggcgcttcgggccgtacgtgacggac
ggcgagacgaacgcgtcgctgcgccgtgaccagacgccggagtcgctcaccgtcgagcag
gcttcggagatgctggccgagcggcgggcgcggggtccggcgaagccgcgcaagaaggcg
gccgccgcgaagaagaccacagcggcggcggacggcgcggcgccggcgaagaagaccgca
gccaagaagaccgcggctgcgaagaagacgaccgcgaagaagaccacgacggcggcgaag
aaggccgcgccgaagaaggcggcagcgcgcaagtcttccgagtag
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