Phytohabitans flavus: Pflav_078690
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Entry
Pflav_078690 CDS
T06516
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pfla
Phytohabitans flavus
Pathway
pfla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pflav_078690 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfla03019
]
Pflav_078690 (groL1)
03110 Chaperones and folding catalysts [BR:
pfla03110
]
Pflav_078690 (groL1)
03029 Mitochondrial biogenesis [BR:
pfla03029
]
Pflav_078690 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfla04147
]
Pflav_078690 (groL1)
Enzymes [BR:
pfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Pflav_078690 (groL1)
Messenger RNA biogenesis [BR:
pfla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pflav_078690 (groL1)
Chaperones and folding catalysts [BR:
pfla03110
]
Heat shock proteins
HSP60 / Chaperonin
Pflav_078690 (groL1)
Mitochondrial biogenesis [BR:
pfla03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Pflav_078690 (groL1)
Exosome [BR:
pfla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pflav_078690 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
Pflav_078690 (groL1)
Exosomal proteins of breast cancer cells
Pflav_078690 (groL1)
Exosomal proteins of colorectal cancer cells
Pflav_078690 (groL1)
Exosomal proteins of bladder cancer cells
Pflav_078690 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BCB81459
UniProt:
A0A6F8Y604
LinkDB
All DBs
Position
8365026..8366681
Genome browser
AA seq
551 aa
AA seq
DB search
MAKILSFSDNARHQLEHGVNALADAVKVTLGPRGRNVVLDKRFGAPTITNDGVTIAKEIE
LTNPYQNLGAQLVKEVATKTNDVAGDGTTTATVLAQAMVREGLRNVAAGANPAGLKRGID
AAAEAVSKALLGKAIEVADKQSIAHVATISAQDATIGDLIAEAMEKVGRDGVITVEEGST
LATELEVTEGLQFDKGFISPHFVTDPDAQEAVLEDAYVLITTQKISSVEELLPLLEKVLQ
ASKPLLIIAEDVEGQALATLVVNAIRKTFKVCAVKAPGFGDRRKAMLQDMAILTGGEVVA
PELGYKLDSVGLEVLGTARRIVVDKDNTTVIEGGGNDAEVTDRVSQIRKEIEATDSDWDR
EKLAERLAKLSGGIAVIKAGGATEVELKERKHRIEDAISATKAAVEEGTVPGGGAALAQV
APMLDGGLDFAGNAVTADELVGVSIVRKALDEPLRWIAQNAGHDGYVVVNKVRSNDWGFG
LDAAIGQYVDLVKSGIIDPVKVTRNAVTNASSIAGLLLTTESLIVEKPEKAEPAPAGGHG
HGHGHQHGPGF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgagtttctcggacaacgcccggcatcagcttgagcacggtgtcaac
gcgctggcggacgcggtcaaggtcactctcggcccgcgcgggcgcaacgtcgtgctggac
aagaggttcggcgctccgacgatcacgaacgacggtgtgacgatcgccaaggagatcgag
ctcaccaacccgtaccagaatcttggcgcgcagctggtcaaggaggtggcgacgaagacc
aacgacgtcgccggcgacgggaccaccaccgcgaccgtgctcgcccaggccatggtgcgt
gagggcctgcgcaacgtggccgccggcgccaacccggccggcctcaagcgcggcatcgac
gccgccgcggaggccgtgtcgaaggcgctgctgggcaaggcgatcgaggtcgccgacaag
cagtccatcgcccacgtcgccacgatctcggcgcaggacgccacgatcggcgacctgatc
gccgaggcgatggagaaggtcggccgcgacggtgtcatcaccgtcgaggagggctccacc
ctcgccaccgagcttgaggtcaccgagggcctccagttcgacaagggcttcatctcgccg
cacttcgtgaccgacccggacgcgcaggaagcggtgctcgaagacgcgtacgtgctgatc
acgacgcagaagatctcctcggtggaggagctgctgccgctcctggagaaggtgctccag
gccagcaagccgctcctgatcatcgcggaggatgtcgagggccaggcgctggccacgctg
gtggtcaacgcgatccgcaagaccttcaaggtctgcgcggtcaaggcccccggcttcggc
gaccgccgcaaggcgatgctccaggacatggccatcctcaccggcggtgaggtggtcgcg
cccgagctcgggtacaagctcgactcggtcggcctggaggtgctgggcaccgctcggcgc
atcgtcgtcgacaaggacaacaccacggtcatcgagggcggcggcaacgacgccgaggtg
accgaccgggtctcccagatccgcaaggagatcgaggctacggactccgactgggaccgg
gagaagctggccgagcggctggccaagctctccggcggcatcgcggtgatcaaggccggc
ggcgcgaccgaggtcgagctgaaggagcgcaagcaccgcattgaggacgccatctcggcg
accaaggccgcggtcgaggaaggtaccgtgccgggcggcggcgccgcgctggcgcaggtg
gccccgatgctcgacggcgggctcgacttcgccggcaacgcggtcaccgccgacgagctc
gtcggtgtctcgatcgtccgcaaggcgctcgacgagccgctgcgctggatcgctcagaat
gccggccacgatggctacgtcgtggtcaacaaggtgcggagcaacgactggggcttcggc
ctcgacgcggccattggtcagtacgtcgacctggtcaagtccggcatcatcgacccggtc
aaggtgacccgcaacgccgtcaccaacgcctcctcgatcgccgggctcctgctcaccacc
gagagcctgatcgtggagaagccggagaaggcggagccggcgccggccggtggccacggc
cacgggcacggccaccagcacggacctggtttctga
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