Phytohabitans flavus: Pflav_085820
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Entry
Pflav_085820 CDS
T06516
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pfla
Phytohabitans flavus
Pathway
pfla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pflav_085820 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfla03400
]
Pflav_085820 (mutM)
Enzymes [BR:
pfla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Pflav_085820 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Pflav_085820 (mutM)
DNA repair and recombination proteins [BR:
pfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pflav_085820 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
C1_2
Motif
Other DBs
NCBI-ProteinID:
BCB82172
UniProt:
A0A6F8Y7S9
LinkDB
All DBs
Position
9088094..9088948
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AA seq
284 aa
AA seq
DB search
MPELPEVETVRQGLAKWVTGRRIASVEVRHPRAIRRHMPGADHFAAVLAGHTVLDVCRRG
KYLWLPLDSGDAIIGHLGMSGQLLFQPGDAPDETHLRIRFRFDDDGPELRFVDQRTFGGL
SVSPGGAELPAEIAHIARDPMDPLFSDADFATKLRRKHTEVKRALLDQNLISGVGNIYAD
EALWRSKLHGVRPTDALTKPAAARLLGHIREVLSEALVAGGTSFDALYVNVNGESGYFDR
SLNVYGREGEPCNRCGTPIRREPFMNRSSYSCPRCQPRPAPRSG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttcctgaggtcgagacggtccgccagggcctggccaagtgggtgaccggg
cggcggatcgcgtcggtggaggtgcgacacccgcgggccatccgccggcacatgcccggc
gccgaccacttcgccgcggtgctggccgggcacacggtgctcgacgtgtgccggcgcggc
aagtacctgtggctgccgctggactcgggcgacgcgatcatcggccacctcggcatgtcc
ggccagctgctcttccagcccggcgacgcgccggacgagacccacctgcggatccggttt
cgcttcgatgacgacggcccggagctgcgcttcgtcgaccagcgcacgttcggcggcctg
tccgtctcgccgggcggcgccgagcttcccgccgagatcgcgcacatcgctcgggacccg
atggacccactcttctcggacgcggacttcgcgaccaagctgcgccgcaagcacaccgag
gtgaagcgggcgctgctcgaccaaaacctgatctccggcgtgggcaacatctacgcggac
gaggcgctgtggcggtccaaactgcacggcgtccgcccgaccgacgcgctcaccaagccg
gccgccgcgcggctgctcgggcacatccgcgaggtgctgtccgaggcgctggtcgccggc
ggcacgagcttcgacgcgctctacgtcaacgtgaacggcgagagcgggtacttcgaccgc
tccctcaacgtgtacggccgggagggcgagccctgcaaccgctgcggcaccccgatccgg
cgcgagccgttcatgaaccgctcgtcctactcgtgcccccgatgccagccccgccccgca
ccccgatcagggtga
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