Phytohabitans flavus: Pflav_087260
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Entry
Pflav_087260 CDS
T06516
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfla
Phytohabitans flavus
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfla03016
]
Pflav_087260 (truB)
Enzymes [BR:
pfla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pflav_087260 (truB)
Transfer RNA biogenesis [BR:
pfla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pflav_087260 (truB)
Prokaryotic type
Pflav_087260 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BCB82316
UniProt:
A0A6F8Y879
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All DBs
Position
9216770..9217609
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AA seq
279 aa
AA seq
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MTSHDVVARVRRLARTRRVGHGGTLDPMATGVLVIGVGRGTRLLTYVIGSVKGYAATIRL
GQTTITDDAEGEVVATAPAGHVTDAAIRDGLAALTGAIEQVPSAVSAIKVDGKRAYKRVR
EGEQVMLAARPVTISRLDVLAIRRPAPDVVDVDVEVVCSSGTYVRAIARDLGAGLAVGGH
LTALRRTAVGGFTLAEASTLEELEKVAPEVVNLPLAEAARRFFAVREATVDEARTLSHGG
PLDRAGIDGSYAVFAPDGGLLAIVREREGRARPEVVFTG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgcacgatgtggtggcacgcgtgcggcggctggcgcgcacccgacgcgtgggg
cacggcggcacgctcgacccgatggcgaccggcgtgctcgtcattggcgtggggagaggg
acccggctgctcacgtacgtgatcgggtccgtcaagggctatgcggcgacgatccggctc
ggacagaccacgatcaccgacgacgccgagggcgaggtggtggccaccgcgcctgccggg
cacgtcacggacgccgcgatccgggacggactggccgcgctcacgggcgcgatcgagcag
gtgcccagcgcggtcagcgccatcaaggtcgacggcaagcgggcgtacaagcgggtgcgc
gaaggagagcaggtgatgctcgccgcccggccggtgacgatctcccgcctcgacgtgctg
gcgatccggcggccggcgccggatgtggtggacgtcgacgtcgaggtggtgtgctcgtcc
gggacgtacgtgcgcgcgatcgcccgggacctcggcgccgggctggcggtgggtgggcac
ctgaccgcgctgcggcgcaccgcggtcggtgggttcacgctcgccgaggcgtccacactg
gaggagctggagaaggtggcacccgaggtagtcaacctgccgctggcggaggcggcgcgc
cggttcttcgccgtgcgggaggccactgtggacgaagcccggaccctgtcgcacggcggg
ccgctggaccgggccggcatcgacgggtcctacgcggtcttcgccccggacggcgggctg
ctcgccatcgtgcgggagcgggagggtcgcgcccgcccggaggtcgtcttcaccggctag
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