Phytohabitans flavus: Pflav_088000
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Entry
Pflav_088000 CDS
T06516
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pfla
Phytohabitans flavus
Pathway
pfla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pflav_088000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfla03019
]
Pflav_088000
Messenger RNA biogenesis [BR:
pfla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pflav_088000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
KH_1
KH_KhpA-B
KH_PNO1_2nd
Methyltransf_33
AllH
Motif
Other DBs
NCBI-ProteinID:
BCB82390
UniProt:
A0A6F8Y8K5
LinkDB
All DBs
Position
9297711..9298883
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AA seq
390 aa
AA seq
DB search
MGGMTVVLLIAVLALAVLVLVALVLGARALRGLTATQPAAERADDPAFVAERDRQEESLA
ALRSAAGEASSAVEQAKSAATVARTDAAEAKAEARAARAEARRVLDAARAEADTIMERAH
RQAETDAEQVRTAARRSGEREISMLSAAVKEQAVELERRTARIDERERLHTEEVERFAER
DRRVTASEAELTERESSLAEREVTLAEAEELRRRELERVAGLTADVAKAELVEAIEGQAK
REAALLIRDIEHDARSTAEQRARHIVVDAIQRVASEQTAESVVSVLHLPGDEMKGRIIGR
EGRNIRAFESVTGVNLIIDDTPRRSCSPASTRYAARSAASRWRSWCSTGGSTRTASRRSS
RPPSTRWSGCVSAPRRTRSSRWASPTCTRS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggatgaccgtagtactgctgatcgcggtactggcgttggccgtactcgtgctg
gttgctcttgtccttggcgcgcgggccctgcgtggcctgacggcgacccagccggcggcg
gagcgggccgacgaccccgctttcgtggccgagcgggaccgccaggaggagtccctggcc
gcgctgcgcagcgcggctggcgaggcgtcgtccgcggtggagcaggccaagtcggccgcg
accgtggcccgcaccgacgccgcggaggcaaaggccgaggcccgcgcggcgcgagcggag
gcacgccgggtgctcgacgcggcccgggccgaggcggacaccatcatggaacgggcacac
cggcaggccgagaccgacgcggagcaggtgcggacggccgcccggcgcagcggcgagcgc
gagatctcgatgctcagcgcggccgtcaaagagcaggccgtggagctggagcggcgtacg
gcccggatcgacgagcgggagcggctgcacaccgaggaggtggagcggttcgccgagcgc
gaccggcgggtcacggcgtccgaggcggagctcaccgagcgggagtcgtcgctggccgag
cgcgaggtgacgctggccgaggcggaggagctgcggcggcgcgagctggagcgggtggcc
gggctgaccgccgacgtggccaaggcggagctggtcgaggcgatcgaggggcaggccaag
cgggaggcggcgctgctcatccgcgacatcgagcacgacgcccgcagtaccgccgagcag
cgcgcccgccacatcgtcgtggacgcgatccagcgggtggccagcgagcagaccgcggag
agcgttgtcagcgtcctccacctgcccggcgacgagatgaaggggcggatcatcggccgc
gagggccgcaacatccgcgccttcgagtcggtgaccggcgtcaacctgatcatcgacgac
accccgaggcggtcctgctctcctgcttcgacccggtacgccgcgagatcggccgcctca
cgctggagaagctggtgctcgacgggcggatccacccgcaccgcatcgaggaggtcttcg
agaccgccaagcacgaggtggagcggctgtgtgagcgcgccgcggaggacgcgctcgtcg
aggtgggcatcaccgacctgcacccggagctga
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