Phytohabitans flavus: Pflav_089610
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Entry
Pflav_089610 CDS
T06516
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pfla
Phytohabitans flavus
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfla03400
]
Pflav_089610 (sbcD)
DNA repair and recombination proteins [BR:
pfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pflav_089610 (sbcD)
Archaeal homologous recombinant proteins
Pflav_089610 (sbcD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
BCB82551
UniProt:
A0A6F8Y9B7
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Position
complement(9463061..9464206)
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AA seq
381 aa
AA seq
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MKILHTSDWHVGKVLKGQSRTEEHIAVLAQVVEIARAERPDLVIVAGDMYDSAAPTPEAT
RLVTRALSALRGTGAQVVAIGGNHDNGAALDALRPWADAAGVSLRGTVRESAADHVLEGE
TAGGERWRLVALPFLSQRYAVRAAEMYELTAAEASQTYADHIGRLLGVLCQGFGPGAVNL
VTAHLTVVGATMGGGEREAHSVMGYAVPATVFPGSAHYVALGHLHRAQQVAGPAPVRYCG
SPLAIDFGEGENVPSVAVVEVTAESTAKVRDVPITAAVPLRTVRGTLAELSMMDGDQPGW
LRVYVREAPRAGLREEVQALLPKALEVRIDPDMLPQTAATARAERAGRSPRDLFADYLES
RGHADESVQELFDTLYEEVSA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttgcatacgtcggactggcacgtcgggaaggtcctcaagggacagtcccgg
accgaggagcacatcgccgtgctcgcccaggtggtggagatcgcccgcgccgagcgcccc
gacctggtgatcgtggccggcgacatgtacgactcggccgcccccacacccgaggccacc
cgcctggtcacccgggcgctctccgcgctgcgcggcaccggcgcccaggtggtggcgatc
ggcggcaaccacgacaacggggcggcgctcgacgcgctgcgcccgtgggccgacgcggcc
ggcgtctcgctacgcggcacggtccgcgagtcggccgccgaccacgtgctggagggcgag
accgcgggcggcgagcggtggcggcttgtcgcgctgccgttcctttcccagcggtacgcg
gtgcgcgccgccgagatgtacgagctgacggccgcggaggcgagccagacgtacgccgac
cacatcggacggttgctgggcgtgctgtgccagggcttcgggccgggcgcggtcaatctg
gtcaccgcccatctcacggtcgtgggcgccaccatgggcggcggcgagcgggaggcgcac
tctgtgatggggtacgcggtgcccgccacggtcttcccgggcagcgcgcactacgtcgcg
ctcggccacctgcaccgggcccagcaggtggccggtccggcaccggtgcgctactgcggc
agcccgctcgccatcgacttcggcgagggggaaaacgtgccgtccgtcgccgtcgtcgag
gtcaccgcggagagcacggcgaaggtgcgcgacgtacccatcaccgccgcggtaccgctg
cgcaccgtgcgcggcacgctcgccgagttgtccatgatggacggtgaccagcccggctgg
ctccgggtgtacgtgcgcgaggcgccgcgagccggcctgcgcgaggaggtgcaggcgctg
ctgcccaaggccctcgaggtgcggatcgacccggacatgctgccgcagaccgccgccacc
gcccgcgccgagcgggccggccggtccccacgcgacctcttcgcggactacctggagagc
cgggggcacgccgacgagagcgtccaagagctgttcgacacgctgtacgaggaggtgtct
gcgtga
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