Pseudoalteromonas maricaloris SCSIO 43202: CTT31_00885
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Entry
CTT31_00885 CDS
T08529
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Pathway
pfli03420
Nucleotide excision repair
pfli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CTT31_00885
03430 Mismatch repair
CTT31_00885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfli03400
]
CTT31_00885
Enzymes [BR:
pfli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTT31_00885
DNA repair and recombination proteins [BR:
pfli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTT31_00885
MMR (mismatch excision repair)
Other MMR factors
CTT31_00885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
SAP18
ChrB_N
GREB1_2nd
Motif
Other DBs
NCBI-ProteinID:
USE67754
LinkDB
All DBs
Position
1:complement(253980..256145)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSELLDGLNDKQRDAVAAPLQNMLVLAGAGSGKTRVLVHRIAWLMQVEHASPFSIFAV
TFTNKAAKEMRARVEATLNGPVGGMWIGTFHGLAHRMLRAHHREAKLPESFQILDSDDQQ
RMIRRLLKAMNIDEKKWPPKQLSWYISARKDEGLRPKDIQAYDVNEQLMLNVYSAYQDAC
DRAGLVDFAEILLRCYELLQQQPTLLRHYQQRFRHMLVDEFQDTNSIQYLWLRLLAGSDN
NIMIVGDDDQSIYGWRGAKIENIKRFLDDFNAETIRLEQNYRSTATILKASNALIENNAE
RMGKSLWTDGNQGEPISIYAAFNELDEARFVVGKIKSWLQAGNALSDSAVLYRNNAQSRV
LEEALLQEGLKYRIYGGMRFFERQEIKDALSYLRIISNRNDDAAFERVINTPTRGIGDKT
LSHIRDCARHESLSLWDAAKAVLAQKHLAGRAATAVTKFIELVEQLDDKIAELELAQQAQ
TAIEQSGLMAMYQAEKGEKGRARVENLEELISACGQYELPIDEDFTSPLQGFLAYTSLEA
GEGQADEHEDAVQMMTLHSAKGLEFPLVFMVGVEEGMFPSQQSNEESGRLEEERRLCYVG
MTRAMDKLYISHAESRRLYGQEKHHSPSRFLREIPEDCMEEIRIKTQISRPANSGRFSPS
ISHATFEDSGFNLGQRVLHAKFGAGTVLNYEGAGAQSRIQVSFDDVGSKWLVTAYARLQA
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcagaattactcgacggcctcaacgacaaacagcgcgatgcagtcgccgcg
cctctgcaaaacatgttagtgctcgcaggtgcggggtcaggtaaaacacgagtactcgtt
catcgtattgcttggcttatgcaagttgagcacgcctctccatttagtattttcgcggta
acctttaccaataaggcagccaaagaaatgcgtgctcgtgttgaagcgacgctcaatggc
cctgttggaggtatgtggataggcactttccacggccttgctcaccgcatgttacgcgct
catcaccgtgaagctaaattaccagaatcatttcaaattctagatagcgatgatcagcaa
cgaatgatccgccgtttgctcaaagccatgaatatcgatgagaaaaagtggccacccaag
cagttaagctggtacatcagcgcgcgtaaagacgaaggattaagacccaaagatattcaa
gcatacgatgtcaatgaacagctgatgttgaatgtatatagtgcttaccaagatgcctgt
gatagagccggtcttgttgattttgccgagatcctattgcgctgctacgagctattacag
caacaacctaccttgctacgtcactatcaacaacgcttccgccatatgctagtggacgag
ttccaagataccaacagcattcaatatttgtggctccgcctgcttgcaggtagtgacaac
aatatcatgatcgtaggggatgacgaccagagtatttatggctggcgtggtgcaaaaata
gaaaacatcaaacgttttctggacgactttaacgccgaaacgatccgacttgaacaaaat
tatcgttctactgcaaccattctaaaagcatccaatgcgctcattgaaaacaacgccgag
cgaatggggaaaagtctctggaccgacggtaaccaaggcgagccaatttcaatttacgcc
gcttttaatgaacttgatgaagcacgctttgtggttggcaaaattaaatcttggttacag
gctggcaatgcgctcagcgacagcgctgtactctacagaaacaacgcacagtcccgagtg
ttagaagaagccttgcttcaagaagggttaaaataccgtatttatggcggtatgcgtttc
ttcgaacgccaagagattaaagatgccctgtcttatcttcgtataatcagcaatcgcaat
gatgacgcggcatttgagcgtgtgataaacacgcctacccgtggtattggtgataaaacg
ttaagccatattcgcgattgtgcgcgtcacgaatcactctcactttgggatgcagccaaa
gccgtgcttgcgcaaaagcatttagcaggaagagctgctacggcggtgacaaaatttatt
gaattagtcgagcagctcgacgataaaattgccgagcttgaactggcacaacaagcgcag
acagccattgagcagtcaggtctcatggcaatgtatcaagccgaaaaaggcgaaaaaggc
cgcgctcgagtggaaaacttggaagaattgatcagtgcttgtggtcagtatgagctgcct
atcgatgaagattttacttcaccattacaaggctttttagcctatacctctttggaggca
ggcgaaggtcaggctgacgagcacgaagacgcggtacaaatgatgacgctgcactcggcc
aaaggtctcgagttcccattggtctttatggttggggtcgaagaaggcatgttcccatcg
cagcaaagtaatgaagagtcgggccgcttggaagaagagcgccgtttgtgctacgtcggt
atgacgcgtgccatggataagctatacattagccacgcagaaagtcgccgcttgtatggc
caagaaaaacatcacagcccttcaaggttcttacgtgaaattcctgaagactgcatggaa
gaaatccggattaaaacgcaaatttctcgtccggctaactcgggtcgattcagcccatca
atcagtcacgcgacctttgaagatagcggctttaatttaggccaacgcgtcctccatgcc
aaatttggtgccggcacagtgcttaactatgaaggtgcaggtgctcagtcacgcatccag
gttagctttgatgatgttggtagtaagtggttagttaccgcctatgcaagacttcaagct
ctctaa
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