Pseudoalteromonas maricaloris SCSIO 43202: CTT31_01385
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Entry
CTT31_01385 CDS
T08529
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Pathway
pfli03030
DNA replication
pfli03410
Base excision repair
pfli03420
Nucleotide excision repair
pfli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTT31_01385
03410 Base excision repair
CTT31_01385
03420 Nucleotide excision repair
CTT31_01385
03440 Homologous recombination
CTT31_01385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfli03032
]
CTT31_01385
03400 DNA repair and recombination proteins [BR:
pfli03400
]
CTT31_01385
Enzymes [BR:
pfli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTT31_01385
DNA replication proteins [BR:
pfli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CTT31_01385
DNA repair and recombination proteins [BR:
pfli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CTT31_01385
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTT31_01385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
USE67845
LinkDB
All DBs
Position
1:351120..353876
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AA seq
918 aa
AA seq
DB search
MSQIPQNPLILVDGSSYLFRAYHAPPHLTNSKGEATGAIYGVINMLKSLLKQYQPSHMVV
VFDAKGPTFRNEMYSEYKAHRPPMPDDLRTQIEPIHEIIKAMGLPLVSISGVEADDVIGT
FSKIASEQSRHVLISTGDKDMAQLVNEHVTLINTMTNTILGPEGVVDKFGIGPDLIIDYL
ALMGDKVDNIPGVPGVGEKTALAMLQGLGSIDSLYENLDKIADLGFRGSKTMAKKLEEHQ
AQLKLSYELATIKLDCEVEQDLEQFKIAEMDKDRLIELYGQCEFKRWLAELLDGQSQADI
VDVEAEGSAPAAAQVDTQYETILTKAQLDDWVTKLKAAELIAFDTETTSVNYMQADLVGM
SFAVAPGEAAYLPINHDYVGAPEQLSQEIVFEIMAPLLADPQIKKVGQNLKYDQSVLARA
GLELQGIAFDTMLESYVFNSVGTRHDMDSLALKYLGHKTISFEDIAGKGKNQLTFNQIEL
EKAAPYAAEDADITLRLHQHLWPLIEKENRLKQVFTEIELPLLSVLSRIERTGVHIDGDM
LAKQSIEIEKRLGELEQQAFEIAGEEFNLSSTKQLQAILFDKLALPVIKKTPKGAPSTAE
EVLQELAHDYPLPKLIIEHRGLAKLKSTYTDKLPKLVNADTGRVHTSYHQAVTATGRLSS
SDPNLQNIPIRNEAGRRIRQAFVADNNKQIVAADYSQIELRIMAHLSQDKGLLSAFAEGK
DVHSATASEVFSVLLEEVTSDMRRKAKAVNFGLIYGMSAFGLSRQLDIPRNEAQHYMDMY
FERFPGVLEYMERTREEAADKGYVETLFGRRLYLPDINARNGARRKAAERAAINAPMQGT
AADIIKKAMIKVDEWLQSCDSNDIQLLMQVHDELVFEVHSDKVAEYSEKICELMSAAAAL
DVPLLVEADSGDNWEQAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatccctcaaaatccgttgatcttggttgatggttcttcctatttatttcgt
gcttatcatgcgccaccacatttaacaaattcaaaaggtgaagcaactggtgcgatctac
ggtgtgatcaatatgcttaagagtttgcttaagcaatatcaaccaagtcatatggtagta
gtctttgacgctaaagggccaactttccgcaacgaaatgtatagtgagtataaagcgcat
cgcccgcctatgccggatgatctgagaacgcaaattgagccaatccatgaaataattaaa
gcgatgggcctgccactggtaagtataagtggtgttgaggccgatgacgtgatcggtaca
ttctctaaaatagcgtcagagcaaagtcgccatgtgctaatcagcactggtgataaggat
atggcgcaattggtcaatgaacatgtcacgttgatcaacacaatgacgaatacgatctta
ggccctgaaggggtagtggataagtttggtattggtcctgacttgatcatcgactatctc
gcgttaatgggagataaggtcgataatattccgggcgtaccaggcgttggtgaaaaaacg
gcattggcgatgcttcaggggttaggctctatcgattcgctctacgaaaacttagacaaa
attgctgatttaggttttcgtggctcaaaaaccatggcgaaaaaactagaggaacaccaa
gcgcagctaaaattgtcgtatgaattagccactatcaagctggattgtgaagtagagcaa
gacttagagcaatttaagatagccgagatggataaagatcgcctaatcgagctatatggt
cagtgtgaatttaagcgttggttagctgaattgctggatggtcagtcacaagctgacatc
gttgatgtggaggctgaagggtcggcgcctgcggcggcgcaggtcgacacccagtatgag
accattttgacaaaagcacagcttgatgactgggtaaccaagttaaaagcagccgagctc
attgcttttgatactgaaaccaccagtgttaactatatgcaggcggatctagttggaatg
agctttgcggttgcaccgggcgaagcggcttacttaccaatcaatcacgattatgtggga
gcacctgagcagctttctcaagagatagtgtttgagatcatggcaccactacttgcagat
cctcagatcaaaaaagtgggtcaaaatttaaaatatgatcaaagtgtgcttgctcgtgca
gggcttgaactgcaggggatcgcttttgataccatgttggagtcttacgtatttaacagc
gtaggaactcgccacgatatggactccttggcgctaaaatatttaggccataaaaccatt
agctttgaagacattgcaggcaaaggtaaaaaccaactgacctttaaccaaattgagcta
gaaaaggcggcaccttatgcagcggaagacgctgatattacgctgagattgcatcaacac
ctctggccgctcattgaaaaagaaaatcgccttaagcaggtatttacagagattgaatta
ccgctactgagcgtactttctcgcattgaacgtactggtgtgcacatcgatggcgatatg
ctagcgaagcaaagtatcgagattgaaaaacgcttaggtgagcttgaacaacaagctttt
gaaattgcaggtgaggagttcaacctgagttcaacaaagcaactacaagcgatattgttc
gacaaacttgcgctaccagtgattaagaaaacgccaaaaggcgcgccttcaacggccgaa
gaagtactacaagagttggcgcatgattatccactgccaaaacttattattgagcaccgt
ggcttggctaagctgaaatcaacctataccgacaaattaccaaaattggttaatgcggat
accggtcgcgtgcacacttcttatcatcaagccgttactgcaacgggccgtctaagctca
agcgatcctaacttgcaaaatattccgatccgtaatgaagcgggacgtcgtattcgtcag
gcatttgttgccgacaataataaacaaatcgtcgcggcggattacagccaaatcgagctt
aggatcatggcacatttgtcacaagacaaagggttgttgagtgcctttgctgaaggtaaa
gatgtacacagtgcaacagcgtctgaagtgttttccgtgctgcttgaggaagtgacttct
gatatgcgccgaaaagccaaagcagttaactttggtctgatctatggcatgagtgcgttt
ggtctgtcacgtcagttagatattccaagaaatgaagcgcaacattatatggatatgtac
tttgaacgcttccctggtgtattagagtatatggagcgcacgcgtgaagaggctgctgat
aaagggtatgtagaaaccttattcggtcgccgcttgtatctaccggatatcaatgcgcgt
aatggcgctcgcagaaaagcagcagaacgtgcagccatcaacgcaccgatgcagggcact
gcggcggacatcatcaaaaaagcgatgattaaagtggatgaatggctacaaagctgtgat
agcaatgatatccagttgctcatgcaagtgcacgatgaattagtgtttgaagtacacagt
gataaagttgctgaatacagtgaaaagatctgtgagttgatgagcgctgcggcagcactt
gatgtaccgttactagttgaagccgacagtggtgacaactgggaacaagcacactag
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