Pseudoalteromonas maricaloris SCSIO 43202: CTT31_01990
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Entry
CTT31_01990 CDS
T08529
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Pathway
pfli03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CTT31_01990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfli03019
]
CTT31_01990
03009 Ribosome biogenesis [BR:
pfli03009
]
CTT31_01990
Messenger RNA biogenesis [BR:
pfli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CTT31_01990
Ribosome biogenesis [BR:
pfli03009
]
Eukaryotic type
Pre-60S particles
RNases
CTT31_01990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
USE67958
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All DBs
Position
1:486293..486838
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AA seq
181 aa
AA seq
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MTFHESNLIWLDLEMTGLEPKTDKILEIATVITDGDLNVLAEGPVVAIHQSDELLDNMDE
WCTNQHGRSGLTARCKASKFTEADAVKQTLDFLKEWVPPGASPMCGNSIGQDRRFLNKYM
PELEAYFHYRNLDVSTIKELARRWKPELLGEIKKKSSHLALDDIKDSIMELKVYQEKFFK
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacttttcatgaatcaaacttgatctggctcgatctagagatgacggggctagaaccg
aaaacagataaaatcttagaaatcgcgacggtgatcacagacggtgatctcaatgtttta
gctgaaggtccagtagtggcaattcatcaaagtgatgagctgttggacaatatggatgag
tggtgcaccaatcaacatggtcgctcaggtctgactgctcgctgtaaagcgagtaagttc
acggaagcagatgcagttaagcaaacactagatttccttaaagagtgggtgccgccaggt
gcttcaccaatgtgtggtaactctattggtcaagaccgtagattcctcaacaaatacatg
ccagagctagaagcttatttccactatcgcaatttggacgtcagtacgataaaagaactt
gcgagacgctggaagcctgaactattgggtgagataaagaaaaaaagctctcacttagca
ctggatgatatcaaagactccatcatggagctgaaagtttaccaagaaaaattcttcaaa
gtttaa
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