Pseudoalteromonas maricaloris SCSIO 43202: CTT31_02260
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Entry
CTT31_02260 CDS
T08529
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Pathway
pfli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTT31_02260 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfli03019
]
CTT31_02260 (groL)
03110 Chaperones and folding catalysts [BR:
pfli03110
]
CTT31_02260 (groL)
03029 Mitochondrial biogenesis [BR:
pfli03029
]
CTT31_02260 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfli04147
]
CTT31_02260 (groL)
Enzymes [BR:
pfli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CTT31_02260 (groL)
Messenger RNA biogenesis [BR:
pfli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CTT31_02260 (groL)
Chaperones and folding catalysts [BR:
pfli03110
]
Heat shock proteins
HSP60 / Chaperonin
CTT31_02260 (groL)
Mitochondrial biogenesis [BR:
pfli03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CTT31_02260 (groL)
Exosome [BR:
pfli04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CTT31_02260 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CTT31_02260 (groL)
Exosomal proteins of breast cancer cells
CTT31_02260 (groL)
Exosomal proteins of colorectal cancer cells
CTT31_02260 (groL)
Exosomal proteins of bladder cancer cells
CTT31_02260 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
USE68005
LinkDB
All DBs
Position
1:565422..567068
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVRFAGDARTKMLKGVNVLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGI
DKAVIAAVEELKTLSVPCSDAKAIAQVGTISANSDKEIGDIIAEAMEKVGRESGVITVEE
GQSLQNELDVVEGMQFDRGYLSPYFINNAEKGQVELDNPHILLVDKKISNIRELLPTLEA
VAKTSKPLLIIAEDLEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGT
VISEEIGLELEKATVEDLGTAKRVVITKDDTTIIDGAGEQEAIDGRVSQIKAQIEEATSD
YDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVAL
VRVASKLESLTGDNEDQNHGIKVALRAMEAPLRQIVSNAGDEASVVVNAVKAGEGNYGYN
AATGEYSDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMVAEIPKEEAAGPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttcgttttgcaggtgacgctcgtacaaaaatgctaaaaggcgta
aacgtactagcagacgcagtaaaagtaacactaggtcctaaaggccgtaacgtcgtttta
gaaaagtcattcggtgcaccaactatcactaaagacggtgtatctgttgcgaaagagatc
gagcttgaagataagttcgagaacatgggcgcacaaatggttaaagaagttgcgtctaaa
gcaaatgacgcagcgggtgatggtactaccactgcaactgttcttgcgcaagctatcgtg
aacgaaggtcttaagtcagttgctgcgggtatgaacccaatggaccttaagcgtggtatc
gacaaagcagttatcgctgctgttgaagagttaaaaacgctttcagtgccttgttcagac
gcaaaagcgattgcacaagttggtacgatttcagctaactctgacaaagagattggtgac
atcattgcagaagcaatggaaaaagtaggtcgcgaatctggtgttatcactgtagaagaa
ggccaatcactacagaacgaactagatgtagttgaaggtatgcagtttgaccgtggttac
ctatcaccttacttcatcaacaacgctgaaaaaggccaagttgagctagataacccacat
atccttcttgtagacaagaagatctctaacattcgtgaacttcttcctacactagaagct
gttgctaaaacaagcaagccgctactaatcattgctgaagaccttgaaggtgaagcgctg
gcgactctggttgtaaacaacatgcgtggtattgtgaaagtggctgcggttaaagctcct
ggctttggtgaccgtcgtaaagcgatgctacaagatatcgcgacactaactggtggtacg
gttatctctgaagaaattggccttgagcttgagaaagctacggttgaagacttaggtaca
gctaagcgcgtggttatcactaaagatgatacaactatcatcgacggtgctggcgagcaa
gaagcaatcgatggtcgcgtatctcagatcaaagcacaaatcgaagaagcaacttctgac
tacgacaaagagaaactacaagagcgcatggcaaaacttgcaggcggtgttgcagtaatc
aaagttggcgcagcaactgaagttgaaatgaaagagaaaaaagaccgcgtagaagatgca
ctacacgcaactcgcgcagcggttgaagaaggtgtagtacctggtggtggtgttgcgcta
gttcgcgtagcgagcaagcttgaatcgctaactggtgacaacgaagaccaaaaccacggt
attaaagtggcacttcgtgcgatggaagcaccacttcgtcaaatcgtttcaaacgcaggt
gacgaagcatcagttgtggttaacgcagttaaagctggcgaagggaactacggttacaac
gctgcaactggcgaatacagcgacatgatcgaaatgggtatcctagacccaactaaagta
acgcgttctgcacttcagttcgcagcatcagttgctggtctaatgatcaccactgaagcg
atggttgctgaaattccgaaagaagaagctgctggtccagatatgggcggcatgggcgga
atgggtggcatgggcggcatgatgtga
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