Pseudoalteromonas maricaloris SCSIO 43202: CTT31_04025
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Entry
CTT31_04025 CDS
T08529
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfli03400
]
CTT31_04025
DNA repair and recombination proteins [BR:
pfli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CTT31_04025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
DUF7125
SLFN-g3_helicase
AAA_22
nSTAND_NTPase5
Rad51
AAA_16
RecA_N
AAA_14
AAA
ABC_tran
Zeta_toxin
GvpD_P-loop
Viral_helicase1
DUF6549
NTPase_1
KdpD
AAA_24
T2SSE
AAA_33
nSTAND3
AAA_19
CSS-motif
PAXNEB
cobW
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
USE68330
LinkDB
All DBs
Position
1:956681..958051
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AA seq
456 aa
AA seq
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MAKKKTAFVCSDCGAEFARWQGQCSECKAWNTVTEFRVPSAKSVPQGGSTSGYAGLVEAK
VQTLDEVNLEQLPRFSTGFKEFDRVLGGGVVPGSAILIGGSPGAGKSTVLLQTMCRLAET
MNTLYVTGEESLQQVAMRATRLGLPTNKLKTLAETNVETICQLALREKPSIMVIDSIQVM
HMSDIQSAPGSVSQVRESAAYLTRFAKTNQVAIIMVGHVTKDGTLAGPKVLEHCIDCSIL
LEGSADSRFRTLRGNKNRFGAVNELGVFAMTSQGLKEVNNPSAIFLNRGEAQTPGSLVMV
IWEGTRPLLVEVQALVDYSQLANPRRVTVGLEQNRLAMLLAVLHRHGGLQVSDQDVFVNV
VGGVKVTETSADLALIAALVSSFKNQTLDRQLVVFGEVGLGGEIRPVPSGQERLREASKH
GFTRAIVPKANKPKENIEGMEIVAVSSLSEALEALF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagaaaacagcatttgtatgtagtgattgtggtgccgaattcgcgcgttgg
caaggccaatgctcggagtgtaaggcatggaataccgtaacggaatttcgcgttccatca
gcaaaatcagtccctcaaggcggttcaacgtcaggttatgccggtcttgttgaagctaaa
gtacaaaccttagatgaagttaacctagagcaattacctagattttcaacaggctttaaa
gagtttgaccgtgtacttggtggtggtgttgtaccgggaagtgcaatattaattggtggt
agccccggcgctggtaaaagtacggtgttgctgcaaactatgtgtcgccttgccgaaacc
atgaacactttgtatgtcactggtgaagagtcgctgcaacaagttgccatgcgtgcgaca
cgattggggctgcctacaaataagcttaaaacactcgcagaaaccaatgttgagacgatt
tgtcagctcgcgcttcgtgaaaagccaagtattatggttatcgactcaattcaagtaatg
catatgagtgatatccaatcggcacccgggtcggtttctcaagtacgtgaaagcgctgct
tatttgacgcgttttgccaaaaccaatcaggttgccattattatggtggggcatgtaact
aaagatggtacactggccggtcctaaggtgctggagcattgtattgactgctccatttta
ctggaaggcagtgccgacagccgctttagaacattacgtggcaataaaaaccgttttggt
gctgtaaacgagttgggtgtgtttgctatgacaagccaaggcttaaaggaagtaaacaat
ccttcggctattttcttaaatcgtggtgaagcgcaaacaccaggctcattagtcatggtt
atttgggaaggtacgcgaccattactcgtggaagtccaagcactagtcgactattcacag
ctcgccaacccgcgtcgcgtcaccgttggtttggaacaaaatcgtttagccatgttactt
gcggtattgcatcgtcacggcggtttgcaggtgtcggatcaagatgtgtttgtaaacgtt
gtaggcggtgtcaaagtgaccgaaaccagcgctgatttagccttaatagccgcactggtt
tcaagctttaaaaaccaaacgttagacaggcagctggtggtatttggtgaggtggggtta
ggaggtgagatccgccctgtgccaagtgggcaagagcggttgcgtgaagcatctaagcat
ggatttacaagagcaattgtaccaaaagcaaataaaccaaaagaaaatattgaagggatg
gaaattgttgccgtctctagccttagcgaagcgcttgaggcacttttttaa
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