Pseudoalteromonas maricaloris SCSIO 43202: CTT31_04710
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Entry
CTT31_04710 CDS
T08529
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfli03016
]
CTT31_04710
Enzymes [BR:
pfli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CTT31_04710
Transfer RNA biogenesis [BR:
pfli03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CTT31_04710
Prokaryotic type
CTT31_04710
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Peptidase_U40
Motif
Other DBs
NCBI-ProteinID:
USE68455
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All DBs
Position
1:1113403..1114350
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AA seq
315 aa
AA seq
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MARRTKGRAIDGILLLNKPQGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAQLGERTTTSDSDGEIVETRPVNVTLEQLEQEIASFLGESDQ
YPSMYSALKYQGQPLYKYAREGIEVPRKCRKINVYRITLDEYDEQTQQIQMTVHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSEVGHYPSDKMITLVELEALLEKAKAEEVAPSTYLDE
LLLPMDTALVDLSVVDISAEQGVAFGHGQTVVVENLPDGIVKVVADGKFVGIGERNPQGL
LKAKRALSSAEPESQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgcaccaaaggccgtgcgatcgacggcattctgttattaaataaaccgcaa
ggcatttcttctaacaaagcactgcagcaagcaaagggcatttatttcgctcaaaaagcg
ggccacaccggtgctttggatccgctggcaacaggtatgttgccaatttgctttggtgaa
gcgactaagtttacccagtttttgcttgataccgataaaacctacgtggtgagagcacag
ctgggtgagcgcacgacgacatcagattctgatggtgaaattgttgaaacgcgaccagta
aatgtaacacttgagcagctagagcaagaaattgccagcttcttgggtgaatctgatcag
tacccttcgatgtattcggcgctcaaatatcagggccaaccgctatacaaatatgcccgt
gaaggcatcgaagtaccgcgaaaatgccgcaaaattaatgtttatcgtatcacgttagac
gaatatgacgagcaaactcaacaaattcaaatgacggtgcatgtgtctaagggcacttat
attcgtacgatagtcgatgatttgggggaaaagcttggctgtggtgcgcatgtcattatg
ttacaccgtagtgaagttggtcattaccctagcgacaaaatgattaccttagtcgagctc
gaagcgttacttgagaaagcaaaagcggaagaagttgcgccttctacttatctcgatgaa
ttattgttgccgatggataccgctttggtcgacttgagcgttgttgatattagcgctgag
caaggtgttgcttttggtcatgggcagaccgttgttgtcgaaaatttaccagacggtatt
gttaaagtggttgctgatggcaagtttgttgggattggcgagcgtaatcctcaagggtta
ttgaaagcaaaacgcgcgctatcttccgctgagccggaatcacaataa
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