Pseudoalteromonas maricaloris SCSIO 43202: CTT31_06300
Help
Entry
CTT31_06300 CDS
T08529
Name
(GenBank) AAA family ATPase
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Pathway
pfli03030
DNA replication
pfli03430
Mismatch repair
pfli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTT31_06300
03430 Mismatch repair
CTT31_06300
03440 Homologous recombination
CTT31_06300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfli03032
]
CTT31_06300
03400 DNA repair and recombination proteins [BR:
pfli03400
]
CTT31_06300
Enzymes [BR:
pfli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTT31_06300
DNA replication proteins [BR:
pfli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CTT31_06300
DNA repair and recombination proteins [BR:
pfli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CTT31_06300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_14
AAA_30
PIF1
AAA_19
AAA_18
AAA_7
AAA_2
ResIII
TIP49
TsaE
AAA_assoc_2
Herpes_V23
Mg_chelatase
Rad17
nSTAND3
AAA_24
TniB
SKI
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
USE68751
LinkDB
All DBs
Position
1:1472798..1475125
Genome browser
AA seq
775 aa
AA seq
DB search
MSYQVLARKWRPQNFHELMGQEHVKQALVNALNEKRLHHAYLFTGTRGVGKTTIARIFAK
SLNCEQGVTSTPCGQCSACTEIETGKFIDLIEIDAASRTKVEDTREILDNVQYAPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLNAMTQ
GQIVEQLEKILPLEQVAFDPVALQTLAKAADGSMRDALSLTDQAIAQTNGNLTVPAVQSM
LGLMDSAHAVILLSAILCHDGEALLNAIEKIALQNGNFVSVLDDLIALLHVIQLTQLVPS
AARLSNFDNNDIKLFAEQLVPQQGQLLYQLLLNGKKDLKWAPEPKLGFEMVMLRLMAFEK
ESHSVVPSAPVSQETSEKQSKVGDLRALLKKPTEDNATVAASPQVQPTATPTYAPEATTS
TTQQTTQYEPVSPTPAAQSQAPVASVSSEAEMANQYDSIMSQAVEQGFQEQVPAHHHESA
PVDDAAYAQMASQNQEDWSRPEVQNQSASEPAATASVTEQQNQAQSAIARILKNRNISGA
GRLVGANGEVKKSEAPSAPMPIEQAPATTVTTPEYQPEPQHAQPATPRLAPKKQKKEAFQ
ERHKPITENLAPELLEQLSPVKQDDNEQSIQVEIPAPENFVSPISDIKFAHQSDDWANMI
EKMQLGGRIRQYALHSVITQQGAQVQLQVDASQQHLDSAVLREKLTESLSALFEQPITLE
INYIDTVNNTPFLVQQQLDEHRLVQAKAAMRDDPLVSAFVQEFDAMLDENSVQAL
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctggcgcgaaaatggcgtccgcaaaacttccatgaattaatgggg
caggagcatgttaaacaagctctggtcaacgcacttaatgaaaagcgtttacaccatgcc
tatttattcaccggaacacgtggtgtgggcaaaacaaccattgctaggatctttgctaaa
agccttaactgcgaacaaggcgttacttcaacgccttgtggtcagtgtagtgcctgcact
gagattgaaactggtaagtttatcgatttaatcgaaattgatgcggcttctcgtacaaaa
gttgaagacacgcgagaaatcttagacaacgtacaatatgcaccaactcgtggtcgctac
aaggtttatctcatcgatgaagtgcatatgctgtcgaagcacagttttaatgcgctcttg
aaaaccttggaagagccgccagagcatgtaaaatttttgctcgccacaactgatccacag
aagttgcctgtgactattctgtcccgttgtttacagttcaatctgaacgcaatgacacaa
gggcaaatagttgaacagttagagaaaatcctgccgctagagcaagttgcctttgatccg
gtggcgctacaaacgttagcgaaggccgctgatggcagtatgcgtgacgcactcagtttg
acagatcaggctattgcacaaacaaatggcaatttaacggtgcctgcagtgcaatctatg
ctgggactgatggatagtgctcatgcggtcattttgctgtctgcaattttatgccacgac
ggtgaagccttactcaatgcgattgaaaaaatagcactacaaaacggtaattttgtcagt
gtgctggacgatttaattgcgctattgcatgttattcagctcactcaactcgtgcctagt
gctgcgcggttatcaaattttgataacaacgacatcaagctatttgcagagcaattagta
ccgcaacagggccagttgttgtatcaactgctgttgaatggcaaaaaagacctaaagtgg
gcacccgagcctaaacttgggtttgagatggtcatgctgcgcttaatggcgtttgaaaaa
gaaagtcatagtgtagtgcctagcgctcctgtgagccaggagacttctgaaaagcaaagc
aaagtaggggatttacgagcgctgttaaaaaagccaacggaagataacgctacggtagcg
gcatcacctcaggtacagccgacagcaacacctacatatgcaccagaagcaacgacatca
accacgcaacaaacaacacagtatgagccggtgtcgccaacgcctgctgcgcaaagccaa
gcaccagtcgcctctgtgtcatctgaggcggagatggccaatcaatacgacagcatcatg
tcacaggcggtagagcaggggttccaagaacaagttcctgcacatcatcatgaaagtgcg
ccagttgatgatgctgcatacgcgcaaatggcatcacaaaaccaagaggattggtctcga
cctgaggtgcaaaatcaaagcgcttcagaacctgctgctacagcaagtgttaccgagcag
caaaatcaagcccagtcagcaatagcacgaattttaaaaaatcgtaatatctctggggcg
ggtcgattggtgggagccaatggtgaggtaaaaaagtctgaggcgcctagtgcgccaatg
ccaatagagcaagcgccagctacgacagtaaccacacctgagtatcagcctgaaccgcaa
cacgcacagccagcaacacctcgcttggcaccaaaaaagcaaaagaaagaagcgtttcaa
gaacgccataaacctattacggaaaatttagcgccagaattgctagagcagttatcgccg
gtaaaacaagatgataacgaacaaagtattcaagtggagatccctgcaccggaaaacttt
gttagtccaataagtgacattaagtttgctcaccaaagcgacgattgggcaaacatgatt
gaaaagatgcaattaggtggtcgaattcgccagtatgctttacacagcgtgataacgcag
caaggcgcgcaggtacaattgcaagtagacgcgagtcaacagcacttagactccgcagtg
ttgagagagaaactaaccgaaagcctaagcgcattattcgagcagccaataacgcttgag
attaactatatcgacacggtaaacaacacgccgtttttggtacagcaacaattagatgag
cataggcttgtccaagctaaagcggcgatgcgagacgatccactcgtcagcgcatttgtc
caagaatttgacgcaatgcttgacgaaaatagcgttcaggcattgtaa
DBGET
integrated database retrieval system
