Pseudoalteromonas maricaloris SCSIO 43202: CTT31_08205
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Entry
CTT31_08205 CDS
T08529
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Pathway
pfli02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CTT31_08205 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfli02000
]
CTT31_08205 (msbA)
Enzymes [BR:
pfli01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CTT31_08205 (msbA)
Transporters [BR:
pfli02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CTT31_08205 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_24
ABC_ATPase
AAA_22
AAA_29
AAA_16
MMR_HSR1
nSTAND3
APS_kinase
AAA_18
DUF4271
TMCCDC2
Zeta_toxin
DUF2207_C
Col_cuticle_N
Motif
Other DBs
NCBI-ProteinID:
USE69096
LinkDB
All DBs
Position
1:1888638..1890377
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AA seq
579 aa
AA seq
DB search
MQPTDKQIYARLFSYVKDFKLAAIFSVIGMIGYAAMDASFVALMDPFIDEGLTAGNRDVL
KLAPFVVIALVIGRGIFNYMASYCLSYVGSQVVRALRQQLFEHMLYLPVSFHDQHSNGEL
ISKITFDTEQVQQAVTKALQVLIREGAFVFFLLITMFYASWQLSLIFLVVVPIVAVIVTV
VSKRFKKISKNIQDAMGEVTKSSEQMMAGHKVIHGFGGQDKTISHFAKVNNHNRQQRVKM
DATKALSVSIIQIIAASAMAVILAIVAMPSMVDKISSGTFVTLITSMMMMLRPLKQLANV
NSDLQRGISAAKSVFAVIDLEKEKDTGTQSLSRAQGNLQVKDLTFTYPSKNDPVIESLNL
EIKAGQSIALVGRSGSGKSTISNLLPRYYDIEAGSIELDGTNINDYQLADLRAQFSIVSQ
QVVLFNDSIANNIMYSLKQPLSQEALEKVVKQAHVWEFVKDLPEGLNTVVGENGVMLSGG
QRQRIAIARAIVKDAPILILDEATSALDTESERLIQQALEELMADKTTIVIAHRLSTIER
CDCIYVLDKGKIIEQGKHAELVAQEGVYHALCKMQFGEQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccaaccgacaagcagatttacgctagattatttagctatgtaaaagactttaaa
ctcgctgccatattttcagtaattggcatgatagggtacgctgcgatggacgcttcgttc
gttgcgctaatggatccgtttatcgatgagggcctcactgcagggaatcgcgatgtacta
aaactggctccctttgttgtcatcgcgttagttattggacgtggtatctttaactacatg
gcatcgtattgcttgtcttatgttgggtctcaggttgtgcgtgcgttgcgacagcaacta
tttgaacatatgttgtatctacctgtgtcgtttcatgatcaacattctaatggtgaattg
atatcaaaaatcacttttgatactgaacaagtacagcaagccgtcactaaggcgcttcaa
gtgctgatccgtgaaggtgcatttgtatttttcttactcatcactatgttttatgcaagt
tggcagctatcgctcattttcttagttgtggtaccaatcgtggcggtgatagtcacagta
gtatccaagcgttttaagaaaatctccaagaatattcaagatgcgatgggagaagtgacg
aaaagctctgagcaaatgatggcgggtcataaagtcatccatggctttggtggtcaagat
aaaaccatctctcactttgctaaagttaataatcataatcgtcagcaacgcgtaaaaatg
gacgcgactaaagcgctgagcgtgtctatcatccaaatcatagcggcgagcgcaatggcg
gtgatactcgcgattgttgcgatgccttctatggtagataaaatttcatcgggcaccttt
gtcactttgatcacctctatgatgatgatgctgcgtcctttaaaacaacttgccaatgta
aatagtgacctgcaacgcgggatctctgcggcgaaaagtgtgtttgcggtgattgatctt
gaaaaagaaaaggacactggcactcagtccttatctcgtgctcaaggtaacctacaagtc
aaagacttaacttttacttatccatctaaaaacgatccggtaattgagtcattaaacctt
gaaatcaaagccgggcagagtatcgcgttggtgggtagaagtggctcaggaaaatcaacg
atttctaatcttttaccgcgttactatgatattgaagcgggcagtatagagttagacggc
acgaatataaatgattaccagcttgcggatctacgcgcgcagttttccatcgtgtcgcag
caagtggtgttgtttaatgactccattgcaaacaatataatgtactcgttaaagcaaccc
ttatcgcaagaagccctagaaaaagtcgtaaaacaagcccacgtttgggaatttgttaaa
gatcttcctgagggcctaaatactgttgttggtgaaaatggcgtaatgctttctggcgga
caacgacaacgtatcgccatcgcgcgtgctattgtgaaagatgcacctatccttatttta
gatgaagccacatcagcattagacacagaatctgagcgtttgatccaacaagcgttggaa
gagctgatggctgataaaacaaccatagtaattgcccatcggttatcgacaatcgagcgt
tgtgactgcatctatgtgctagataaaggcaagatcatcgaacaaggcaagcatgctgaa
ttagtcgcgcaggaaggggtttatcatgcactttgcaaaatgcagtttggtgagcaataa
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