Pseudoalteromonas maricaloris SCSIO 43202: CTT31_11935
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Entry
CTT31_11935 CDS
T08529
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfli03032
]
CTT31_11935
03036 Chromosome and associated proteins [BR:
pfli03036
]
CTT31_11935
03400 DNA repair and recombination proteins [BR:
pfli03400
]
CTT31_11935
DNA replication proteins [BR:
pfli03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CTT31_11935
Chromosome and associated proteins [BR:
pfli03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CTT31_11935
DNA repair and recombination proteins [BR:
pfli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CTT31_11935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
USE71009
LinkDB
All DBs
Position
1:complement(2716042..2716314)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDQIAADADISKAAAGRALDSFIESVTGALKDGDSVALVGFGTFSVRERAARSG
RNPQTGETIQIAAANIPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaattaatcgatcaaatcgcagctgatgctgacatttctaaagcggct
gctggtcgtgcgctagattcattcattgagtctgtaacgggtgcactaaaagacggtgac
tctgttgcacttgtaggttttggtactttctcagtgcgcgagcgtgctgcacgttctggt
cgtaacccacaaactggtgagactattcaaatcgcagcagctaacatcccatctttcaaa
gcgggtaaagcgcttaaagacgcagtaaactaa
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