Pseudoalteromonas maricaloris SCSIO 43202: CTT31_12405
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Entry
CTT31_12405 CDS
T08529
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Pathway
pfli03030
DNA replication
pfli03430
Mismatch repair
pfli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTT31_12405
03430 Mismatch repair
CTT31_12405
03440 Homologous recombination
CTT31_12405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfli03032
]
CTT31_12405
03400 DNA repair and recombination proteins [BR:
pfli03400
]
CTT31_12405
Enzymes [BR:
pfli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTT31_12405
DNA replication proteins [BR:
pfli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CTT31_12405
DNA repair and recombination proteins [BR:
pfli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CTT31_12405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
USE69876
LinkDB
All DBs
Position
1:complement(2811575..2812285)
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AA seq
236 aa
AA seq
DB search
MHTRQIVLDTETTGIDPKAGHRIIEIGCVELVNRRLTGNNFHVYINPQRDIEEEAIDVHG
ITNEFLRDKPFFHQIAQEFFDYIKGAELVIHNAPFDVGFMDHEFAKLNQGFPATHDYCQV
LDTLVMARDLHPGQKNSLDALCRRYDIDNSKRTLHGALLDSEILADVYLSMTGGQKKLNL
ANQNKGDQANSAGGIIRLDSNRPALKVLRASADEEQAHTERLELVNKACGQSLWQQ
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcacacacggcaaatagtactggatacagaaaccacaggtattgatcctaaagcaggg
cacaggattattgaaattggttgtgttgagctggtcaatcgcagactaacggggaataac
ttccacgtatatattaaccctcagcgcgacattgaagaagaagccattgatgttcatggt
atcaccaacgaatttttacgtgataaaccttttttccatcaaattgcgcaagagtttttt
gactacattaaaggagctgagcttgtcattcataacgcgccgttcgacgtcggctttatg
gaccatgagtttgctaagttaaaccaaggctttccggcgacccatgactattgccaagtg
ctagatactttggtgatggcaagggatcttcatccgggccagaagaacagcctagatgcg
ctttgccgtcgctacgatatcgataactcaaagcgtacgctgcacggcgctttactggat
tctgagatccttgctgatgtttacctgtcgatgacgggaggccaaaaaaagctgaatttg
gcgaatcaaaataaaggtgatcaggctaactcagccggtggcattattcgtttagacagt
aatcgtcctgcacttaaagttttacgtgcttctgccgatgaagaacaagcacatacagaa
cgtttagagcttgtaaacaaagcttgtggacaaagtctgtggcagcaataa
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