Pseudoalteromonas maricaloris SCSIO 43202: CTT31_19110
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Entry
CTT31_19110 CDS
T08529
Name
(GenBank) transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Pathway
pfli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CTT31_19110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfli03000
]
CTT31_19110
03400 DNA repair and recombination proteins [BR:
pfli03400
]
CTT31_19110
Enzymes [BR:
pfli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CTT31_19110
Transcription factors [BR:
pfli03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CTT31_19110
DNA repair and recombination proteins [BR:
pfli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CTT31_19110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HTH_3
HhH-GPD
HTH_23
DUF6233
Motif
Other DBs
NCBI-ProteinID:
USE71207
LinkDB
All DBs
Position
2:273164..274522
Genome browser
AA seq
452 aa
AA seq
DB search
MYTPEVCSQARNSRDARFDGLFFVAVKSTGIYCRPICPAPAAKEKNVEYFQFAHNAAQAG
FRPCIRCRPDSAPGSYAWLGTETTAVRAKKLIDEGALIRHSTEDLADRLGISVRYLNKVF
NQYFGTSPKQYALYKQCDLAKQLLQQSDLPVTQVAFAAGFNSLRRFNDAFQKLYQLSPSQ
LRKDAGSGSAIAIYLSYRPPYNWDKMQQFLAMRIVPGIEWLTENSYGRTVMIQGETGRFT
ATIEPEKHRFKVAIALSDLSLLVQMIAQIRRVLDLDADTCFIESHLHEAAPDLPLQEGLR
LPGIWSEFEAGMRAILGQQISVQAARNLLVLLVETLGEVAEDGMRYFPKPKAVFDSDLAF
FKMPERRKAAIKAFAEQYVGSEHVELDNWLNIKGIGPWTVDYAKMRGLSHPDIYLGGDLG
VKKAMEKSLKTIDIEKCAPFRSYLTFQLWQQL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtatacaccagaagtttgttctcaagctagaaatagtcgcgatgctagatttgatggg
ttgttttttgttgcggtcaagagcaccggcatttattgtcggccaatatgcccagcacct
gctgcaaaagaaaagaatgtagagtattttcaatttgcccacaatgctgcgcaagcaggc
tttaggccttgtattcgctgccgtcccgatagtgcaccgggtagttatgcatggcttggc
actgaaacaaccgcagttagagccaaaaagttaatcgatgagggagccttaatacgtcat
tcgacagaagacttagccgataggttaggcatttcggtccgttacttaaataaagtattc
aatcaatactttggtaccagccccaaacaatatgcactttataagcaatgtgacttagct
aagcagctgttacagcaaagtgaccttcctgtcacgcaagtcgcgtttgccgccgggttt
aattcattacgacgctttaatgatgcattccaaaagctgtatcagttatcaccaagtcaa
cttagaaaagacgccggtagtggctctgccattgcgatttacttgtcttatcggccaccg
tacaactgggataaaatgcagcagtttttagcgatgagaattgtgccaggtatcgagtgg
ttaacagaaaacagttatgggcgaaccgtcatgatacaaggtgaaacagggcgtttcacc
gcgacaatcgagcctgaaaaacatcgctttaaagtggctatcgcgctcagcgatttatcc
ttgttagttcagatgattgcacagatcaggcgggtgttagatttagatgcggacacctgt
tttattgagtctcaccttcatgaagccgcgcctgatttgccgctacaagagggactcaga
ttacccgggatctggagtgagtttgaagcgggcatgagagctattttaggtcaacaaatc
agtgttcaagcggcaagaaacttactcgttttattggtcgaaacgctcggtgaggtggct
gaagatggcatgcgttatttccctaagcctaaggccgtatttgatagtgatcttgccttt
ttcaaaatgcctgaacgacgaaaggcggctattaaagcttttgctgaacaatacgttggt
tcggaacatgttgaacttgataactggttaaatattaaaggtataggtccttggactgtc
gactatgcaaaaatgcgcggattgagtcacccagacatatacttgggtggtgatttgggt
gtcaaaaaggcaatggaaaaatccttaaaaacaatagatattgaaaagtgtgctcctttt
cgttcttatctaacttttcaactatggcaacaattatga
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