Pseudoalteromonas maricaloris SCSIO 43202: CTT31_21050
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Entry
CTT31_21050 CDS
T08529
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfli03016
]
CTT31_21050 (rnd)
Enzymes [BR:
pfli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CTT31_21050 (rnd)
Transfer RNA biogenesis [BR:
pfli03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CTT31_21050 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
USE72075
LinkDB
All DBs
Position
2:complement(713257..714387)
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AA seq
376 aa
AA seq
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MQYQVIESQTALDEFVLSISKAKVLAVDTEFMRRRTLYPEIALLQIFDGNHLALIDPLAD
MDFSRLWTLFSDTSVLKVLHSPSEDIEVFLKFAGFIPSPIFDTQFALQLLGEGSCIGFAN
MVKQLRDVDIDKSESRTDWLRRPLTQSQLDYAASDVYHLLPCFETIQARVNEKQLFNIVL
QESELLAQKRSFRQPDEVLYLDVKNVWQLKPRDLAILKELAAWRRAKAEKKNLALNFVLK
EHNMVEIAKRRPSSLGSLRNVPGVEPMEVNRSGKEILACIEKAKEVSEQDCPQRVRRLID
FKGYKAACKDIKQIIAEVAKTNDIPVDVFASKKQINQVISWSWKKSPEEKQLLMKPDLAL
GWRAALVADKLDSWWQ
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtatcaagttattgaaagccaaacagcactagatgaatttgtcttgtctatttcg
aaagccaaagtgctcgccgtcgacaccgaattcatgcgtcgccgcaccttatacccagaa
attgctctgttacagatctttgatggtaaccaccttgcccttatcgatccactagccgat
atggattttagtaggctgtggacgttgttttcagatactagtgttttaaaagtacttcat
tctccatcagaagatatcgaagtatttctaaagtttgcaggttttatcccatcaccaata
ttcgatacccagtttgctttacagttgttaggtgagggtagttgtattggttttgctaat
atggtgaagcaacttagagacgttgacattgacaaaagtgaatccagaacagattggtta
cgccgccctttaactcaaagccaattagattacgccgcctccgatgtatatcatttactg
ccatgttttgagactattcaagcacgagtaaatgaaaagcagctatttaacatagtactt
caagagagtgagttgcttgcccaaaagaggagcttccgtcaaccagatgaagtactttat
cttgatgtcaaaaacgtgtggcaacttaagcctagagatcttgctatcctaaaagaactt
gcagcgtggcgtagagccaaggcagagaaaaagaacttagcgctaaatttcgtgcttaaa
gaacataacatggtagaaattgccaaacgtcgtccaagctcactgggcagtttacgtaat
gttccaggtgttgagccaatggaagttaatcgctctggtaaagaaattctcgcctgtata
gaaaaagcaaaagaagtaagtgaacaagattgtccacaacgcgtgagaaggcttatcgac
tttaaaggttacaaagcagcgtgcaaggatattaaacagattatcgccgaagtcgccaaa
actaacgatattccggttgatgtgtttgcttcgaaaaaacaaatcaatcaggtgatcagc
tggtcgtggaaaaagtcaccggaagaaaagcaattgctgatgaaacccgatcttgcgtta
ggctggagggctgcgcttgttgcagataagctagacagttggtggcagtag
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