Pseudoalteromonas flavipulchra: CTT31_21765
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Entry
CTT31_21765 CDS
T08529
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pfli
Pseudoalteromonas flavipulchra
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfli03400
]
CTT31_21765
DNA repair and recombination proteins [BR:
pfli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CTT31_21765
Archaeal homologous recombinant proteins
CTT31_21765
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
USE71710
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All DBs
Position
2:887056..888255
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AA seq
399 aa
AA seq
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MKVLHTSDWHLGQSFYEHDRSEEHQLFLDWLCDALVEQQVDVLLISGDIFHTATPPASAE
KQLYTFIQKASQLCPQLHIILIAGNHDSANRIETAKPLLTLFNTHVIGRFNKQAPEQVVI
DLPIAAQHMHVVAMPFLRSADLPKALDDEFDYQTGVQLAYQHALSTIEEVKGPIVLMGHL
HAKGGTISEDSERNLNIGGFDAVSAGVFGEQFDYVALGHLHKAQTVAKQSAIRYCGTPLP
MSFSERNYKHQVLLAEFNEQGLVDVNPLYVPRFKDVLYIPENGAKRLTELCEAIAAQDFS
KFDSAPYIRLKLSAAETNSRFRAEIDEALKGKDIKFCGIERVSKGAATSEWLFEDLGKVE
SLSPNTLLDIAYREIEPEQEKAPATLHEKLAEVIASMEE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttacacacgtctgactggcacttagggcaatcgttttacgagcatgatcgc
agtgaagagcatcagctgtttttagactggctatgcgatgcgctggtggaacagcaagtc
gatgtactgttgatcagcggtgatatttttcataccgcaacaccgcccgccagtgctgaa
aagcaactgtatacctttatccaaaaagcatctcaactttgccctcagctgcacattatt
ctgattgctggcaaccacgattctgctaatcgcattgaaaccgcaaaaccactcttaacc
ttattcaacacccatgttattggacgctttaacaaacaagcgcctgaacaagttgttatc
gatttacctatcgcagcgcagcatatgcatgttgtggcaatgccatttttgcgcagtgct
gatttaccaaaagcgctagatgacgagtttgactatcaaaccggggtgcaattagcttat
cagcatgcgctaagcacgatagaagaagtgaaaggtcctattgtgctaatggggcatctg
cacgccaaggggggaacgatttctgaagattctgagcgtaacctcaacattggcggtttt
gatgcggtatctgcaggcgtgtttggcgagcagtttgactatgttgcgttaggtcattta
cataaagcgcaaaccgtcgctaagcaaagtgctatcagatactgcggcacacctttgcca
atgtcattttccgaacgcaattataagcatcaggtattgctcgctgaatttaatgagcaa
ggtctggtcgatgtaaaccccctttacgttccccgttttaaagatgtgctatatatccct
gaaaatggtgcaaagcgcttgactgaattatgcgaagctatcgcggcgcaggattttagc
aagttcgatagcgctccctatattcgcttaaaattatctgcagcggaaaccaatagccgc
tttcgagccgagattgatgaagcgctaaaaggaaaggatattaagttttgtggtattgag
cgggtgtctaaaggcgcagctaccagtgagtggttgtttgaagatttgggcaaagttgaa
tcgttatcgcccaataccttgttggatattgcctatcgcgaaattgaaccagagcaggaa
aaagcacccgcgacattacatgaaaagttagcagaagtgatcgcgagcatggaggagtag
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