Ptychodera flava: 139115819
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Entry
139115819 CDS
T10724
Name
(RefSeq) nucleoporin Nup37-like isoform X1
KO
K14302
nuclear pore complex protein Nup37
Organism
pfll Ptychodera flava
Pathway
pfll03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139115819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139115819
03036 Chromosome and associated proteins [BR:
pfll03036
]
139115819
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139115819
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139115819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EIPR1
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
139115819
NCBI-ProteinID:
XP_070534298
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Position
2:complement(15999640..16599762)
Genome browser
AA seq
321 aa
AA seq
DB search
MFDKTKSGGITYTFDTPDTVTAVEFCPLEQFSQLIAYGDCLRVSLGICRFQDEDSEIDGF
EFEHLRDFHHGTRVTTIAWSPETSLETLPRQVKFCTAGADSKLRLFSSDLKSEDTVTVMD
GHTSYVNDVVFEPTEGQQIASVSDDHTCRVWDLDGLQRACFPLYSPGMSVCWHPDEPAKL
MVAEKKGTIRFYDLITHQPIMSLDAGHVTLMSADICFLDPVRIGCIANGNWMMWDSTRSS
LPQENRQAHNEGGRNFRWSRVSENLFATTGQNEVKVFHLGHSQVPVSSSLPVTAGGLCWH
ATLPVCAVGGDGKVHLWMTVI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataaaactaaaagtggaggtatcacctacacgttcgacacgccagacacggta
acagctgttgagttttgtccactcgaacagttttctcagctgatcgcatatggagattgt
ttgagggtgtcactggggatatgtcgctttcaggatgaagactcagagattgatggtttt
gagtttgaacatctcagagattttcatcatggaacaagggtaacaacaatagcatggagc
ccagaaacttcattagaaactctaccaagacaagtcaaattttgtacagcaggagcagac
agtaaactcagattgttttcatcagatcttaaaagtgaagacactgttacggtaatggat
ggtcacacaagttatgtcaatgatgttgtctttgaaccaacagaaggtcaacaaattgcc
agtgtcagtgatgatcacacttgccgagtctgggacttggatggactccagagggcgtgc
tttcctttgtactcacctggtatgtctgtgtgttggcatccagatgaaccagccaagcta
atggtggctgaaaagaaaggcacaatcagattttatgatctcataacccaccaaccaatt
atgtcactagatgcaggtcatgtgactttgatgtcggctgatatctgcttccttgaccca
gttcgtattggttgtattgcaaacggtaattggatgatgtgggattccacaaggtcaagc
ctgccacaggagaacagacaagctcacaatgagggtggtagaaatttcagatggtcacga
gtcagtgagaatctgtttgccacaacaggacaaaatgaggtcaaagtattccatctagga
cactcacaggtacctgtgtcaagttcattaccagtcacagcagggggtctgtgctggcat
gccactttaccagtttgtgctgttggtggagatgggaaagtacatctatggatgacagta
atatga
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