KEGG   Ptychodera flava: 139116134
Entry
139116134         CDS       T10724                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pfll  Ptychodera flava
Pathway
pfll03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pfll00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    139116134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfll03021]
    139116134
   03036 Chromosome and associated proteins [BR:pfll03036]
    139116134
Transcription machinery [BR:pfll03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     139116134
   Coactivators
    SAGA/TFTC/STAGA complex
     139116134
Chromosome and associated proteins [BR:pfll03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     139116134
    STAGA complex
     139116134
    TFTC complex
     139116134
    SAGA complex
     139116134
    SLIK complex
     139116134
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta EIF3I Beta-prop_EML_2 TFIID_NTD2 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_SCAP WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C CFAP251_N DSE1_N NBCH_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_RIG_2nd PAC11 Beta-prop_WDR41 Beta-prop_Aladin ASA1 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_NOL10_N PROPPIN Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd WD40_RFWD3 TRM82_WD WD40_like WDR54 Beta-prop_DCAF12 Tricorn_2nd WD_LRWD1 DUF7165
Other DBs
NCBI-GeneID: 139116134
NCBI-ProteinID: XP_070534778
LinkDB
Position
17:complement(34337909..34357075)
AA seq 582 aa
MKRVSGEDIASVVVNYLKKRQFTDSEQSCKKEMKPSNFITDMAGDVTMGMETSVTNTVSY
TTCEHDPELYDTHYSKFQDFVEGAVKEYKTELVALLYPLFVHLYIEMICQGHKAAGNDFL
YKYQGQFLDEPDQKELIDNLCGVIQINDILCKPIVKNFRESKYTINISESTLQYLLRFLQ
SDDNTLLLKMLNTYIKLDVNGLQNGQFDLQEDGNPDNAVSMETEAAKKKSSSSVTLRSLK
ECIQKVREGPPSLSSILYYSLINTYQGLNCVNISKDQKLLCGGFDNSVLKLWSLTPKKLK
SAEHEVEISKIHVAGDFISESYQEDRFGNENKTLQGHSGPVYGSCFTNDSTYLLSCSEDT
TVRLWNLETYTNAVVYRGHSLPVWDVDMSVVGDYFVTASQDHTARLWILNRNYPLRVFAG
HMADVDCIRYHPNSNYIATGSSDRTVRLWSVQDGKPVRLFTGHKGSVSCLAFSPNGKCLA
SSGEDRKIKLWDLSSGKLLKELRGHIDTVCSLSFSNDSTMLASGGLDNTIRIWDVRQSLS
SSQSDSSTSCEMLGAFPTKSSTVHYVGFVSCNLLLASGAVVT
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgaagagagtttcaggtgaagatatagcatcagttgtggttaattacctgaaaaagcgt
cagtttacggatagtgaacagtcctgcaagaaggaaatgaaaccatctaatttcatcact
gacatggcaggcgatgttaccatgggaatggagacaagtgtaacaaacactgtttcatac
acaacttgtgaacatgatccagaactgtacgatactcactattctaaattccaagacttt
gttgaaggagctgttaaagaatacaaaacagagttagttgcactgctgtacccattgttt
gttcatctctacattgaaatgatatgtcaaggtcacaaagcagcaggcaatgattttctg
tacaagtaccaaggccagtttcttgatgagccggatcaaaaagaattgattgacaatctg
tgtggagttatacaaattaatgatattctctgtaaacctattgtcaagaacttcagagaa
agtaaatacacaatcaacatatctgaatcaacattgcagtatttgttgaggtttctacaa
agtgatgataacacgctgcttctgaaaatgttaaatacttacatcaaattagatgtcaat
ggtttacaaaatgggcagtttgacctccaggaggatggtaatcctgacaacgctgtatcc
atggaaacagaagccgccaaaaagaaatcttcaagttccgttactctgaggtccttgaaa
gagtgtatacagaaagtacgagagggtccaccatcattgtcatccattctttattacagt
ttgatcaatacttatcaaggactgaattgtgtcaacatatcaaaggaccaaaagctgcta
tgtggaggttttgataattccgtgcttaaactctggagtttaactcctaaaaagttgaag
tcagctgaacatgaagttgaaatctctaagatacatgtcgctggtgacttcatcagtgaa
tcttatcaagaagataggtttggaaacgagaacaaaacacttcaaggtcacagtggtcca
gtctatggaagttgttttacaaacgattctacttatctgttgtcatgttctgaagataca
accgtgaggttgtggaacctagagacttacacaaatgcagttgtctatagagggcatagt
ttacctgtatgggatgttgatatgagtgttgtaggtgattatttcgtgactgcaagtcaa
gaccacactgccagattgtggattctcaatagaaactatccactcagggtgtttgcagga
cacatggcagatgttgattgtatacgttaccatcccaacagtaactacatagcaacaggt
tcctcagacagaacagtgagactgtggagtgtacaagacgggaaacctgtcaggctgttc
acaggacacaagggaagtgtttcttgtctggcgttttcaccaaatggtaaatgtctagca
tcatcaggggaagacaggaaaatcaagctttgggatctgagcagtggcaagttattaaaa
gaactcagagggcacatagacacagtttgcagccttagtttcagcaatgatagtacaatg
ttagcttctggtggattggacaacacaatccgtatctgggatgttagacagtcactcagt
tccagccaatcagattccagcacatcatgtgagatgcttggagcgtttcccaccaaatca
tcaactgtacattacgtcggctttgtttcatgtaacttattattagcatcaggcgcagtt
gtcacgtga

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