Ptychodera flava: 139116786
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Entry
139116786 CDS
T10724
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pfll Ptychodera flava
Pathway
pfll03018
RNA degradation
pfll03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139116786
09123 Folding, sorting and degradation
03018 RNA degradation
139116786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139116786
03041 Spliceosome [BR:
pfll03041
]
139116786
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139116786
mRNA degradation factors
5'-3' decay
Lsm complex
139116786
Spliceosome [BR:
pfll03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
139116786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
139116786
NCBI-ProteinID:
XP_070535545
LinkDB
All DBs
Position
18:complement(9092539..9098097)
Genome browser
AA seq
106 aa
AA seq
DB search
MADKDRDREKKRKESILDLTKYIDKPIRVKFQGGREASGILKGFDPLLNLVLDGTTEYMR
DADDPYKLTDETRHLGLVVCRGTSVVLICPADNMEAIANPFVQQEA
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagatagagatcgggaaaagaaaaggaaggaaagtattttggatttaacc
aagtatatcgacaagccaatcagggtgaaatttcagggaggcagagaagcaagcggaatt
ttaaaaggttttgatcctctattgaacttagtattagatggaacaacagagtacatgcga
gatgcagatgatccgtataaattgacagatgagacaagacatttgggattggtcgtctgt
cgtggtacttcagttgtccttatctgccctgctgataacatggaagctattgccaatccg
tttgtacaacaggaggcatag
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