Ptychodera flava: 139117077
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Entry
139117077 CDS
T10724
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pfll Ptychodera flava
Pathway
pfll03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139117077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfll03041
]
139117077
Spliceosome [BR:
pfll03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
139117077
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
139117077
NCBI-ProteinID:
XP_070536010
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All DBs
Position
18:19313577..19333780
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AA seq
676 aa
AA seq
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MAVSLSKRDLEELRPWVDKTVKKVLGFSEQTVVTAALNCVSKGMDQTKTVENLKPFLDES
APNFVEQLYSAVSEVKARSKHRKRTFKQSEDGEEVKVAKKPKLPIPEEDEPNIPVLNTQP
SPGQLTEQQIKEMMASARRAIEARKEQLSTLPQTGPPPPPAATPGLVPPHMSSIPPMVEM
NTSQALMNEALEKAKKAAEIQARIQATLNKQPGLLGANMPGLNVARMQGMQSSKPTPLIL
DEQGRTVDATGKAIQLTQRMPTLKANIRAKKRQEFKLVQEKAADVISESSKFFDHRVGFG
PSDRKKKSFKFHEPGKFQQIAQRIRAKAQLEHLQSEIAQAAKKTGISSATKLALITPKKA
TSQDDIPEVEWWDAYILPGESYSNWNKTVTKDEQGNDTEEKFANLTCFIEHPQQIKPPAD
PNKPVELPVFLTKKERKKLRRQTRREAEKEMTEKIRLGLEAPPEPKVRLANLMRVLGNEA
VQDPTKVEAHVRAQMAKRQKQHEEANAARKLTTEQRRDKKLKKITEDTSLGVFVSVYRVR
DLSSPSKKFKVEANCNQLQMTGFVVLYRDVNVVVVEGGPKQQRKFKRLMLSRIKWTDEKR
TKDDDDDDDSDDETERKRDNKCCLVWEGTVKNRAFGTVKFKACPTEKIAREQFRNHGVEH
YWDLAHSESIIEASND
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtctttgtcaaaacgtgatttggaagaactccgaccatgggtcgacaagact
gtgaaaaaagtactcggattttccgagcaaactgtagtcactgcagctttaaattgtgtt
tcaaagggaatggatcaaacaaaaacagtagaaaatctgaaacctttcctcgatgaatca
gcacccaattttgtggagcagctttacagcgctgtcagtgaagtcaaagcaagaagtaaa
caccgcaagagaaccttcaagcaaagtgaagatggagaagaagtcaaagttgctaagaaa
ccaaaactgcctattcctgaagaggatgagcccaacataccagtactcaacacccagccg
agtcctggccagctcactgaacagcaaatcaaagagatgatggccagtgcaaggagggcc
attgaagctagaaaagaacagttgtcaacattgccacagacaggaccaccaccaccacca
gcggcaacaccaggtctagtacctccacatatgtccagcattccccccatggtggagatg
aacacttctcaggcactgatgaacgaagcgttagagaaagccaagaaggcagctgaaata
caggccagaatacaggctacactcaacaaacaaccaggtctgcttggagccaacatgcca
gggttaaatgtagccaggatgcagggaatgcagtcttcaaagccaacaccgcttattcta
gatgaacagggaagaactgttgatgccactggtaaagccattcagctaacccaacgcatg
ccaacattaaaggccaatatacgtgcaaagaagaggcaggaattcaagctagtccaagag
aaagcggcggatgtcatcagtgagtccagtaaattctttgatcacagggtcggctttgga
ccgtcagatcgcaagaagaagagtttcaagtttcacgaacctggcaagtttcagcagata
gcacagaggatccgagcaaaggcacaactagagcatctccagtcagagattgctcaagct
gccaagaaaactggtatctcatctgctacaaagttggcattgatcacgccgaagaaagct
acatctcaagatgacattccagaagttgaatggtgggatgcgtacatcttgccaggagaa
agttactccaattggaataaaacagttacaaaagatgaacaaggaaatgacacagaagaa
aaatttgccaatttgacatgttttattgaacatccccagcagattaaaccaccagctgat
ccaaacaagccagtcgagttgccagtattcctgacaaagaaagagaggaagaaacttcga
agacagaccagacgggaagcagaaaaagaaatgacggaaaaaattcggctgggactggaa
gcacctccagagccaaaggtgcgactggccaacttgatgagagtactgggcaatgaagca
gtacaagacccaaccaaggtggaagcccatgtcagggcacagatggccaaaagacaaaaa
cagcatgaagaagccaatgctgccaggaaacttacaacagaacagcgccgggacaagaaa
ctgaagaagatcacggaggacacgtccctgggtgtcttcgtgtccgtttacagagtccga
gatctgagcagtccttccaagaagtttaaagtggaagccaactgtaaccaactgcaaatg
acaggttttgttgtcttgtaccgggatgtcaacgttgtggtggtagagggaggtcctaaa
caacagaggaaatttaaaagattgatgctgagtagaataaaatggacagatgagaaaaga
actaaagatgatgatgatgatgatgactctgatgacgagaccgagagaaagagggacaac
aagtgctgtcttgtttgggaaggaacagtcaagaacagggcctttggaaccgtcaagttc
aaggcctgccctacagagaaaatagccagggaacaattccgcaatcatggagtggaacat
tactgggacctggcacacagcgagtccatcatcgaagcctcaaacgactga
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