Ptychodera flava: 139117156
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Entry
139117156 CDS
T10724
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfll04121
]
139117156
Enzymes [BR:
pfll01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
139117156
Ubiquitin system [BR:
pfll04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
139117156
Multi subunit type E3
LUBAC complex
139117156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Sharpin_PH
Zn_ribbon_RanBP
zf-RING_2
IBR
zf-C3HC4
IBR_1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-RING_11
Rrn6_HB
Motif
Other DBs
NCBI-GeneID:
139117156
NCBI-ProteinID:
XP_070536125
LinkDB
All DBs
Position
18:21891206..21913206
Genome browser
AA seq
744 aa
AA seq
DB search
MAAGTMLLSKEAQLLRFEPSNYDYPWCSIVDPNDREGTPAIVQIFEQPHGRFHITSKHRG
SQAPLLGFNLNEVDYVIKNTEWHEVTMQRNQKYAIVFHGKAEGQGFATVVQNSLHEIKRA
GTDTSSTRLGNVGIPLPGLTPPKSPKEAWVPPGNMPQGARIRSATLGPRLPSAKSPSVNV
ARIPNVPLLEQLNQAIARGDVDAAQALAVMLAKEKEQTRWDQGPQTINIRIHIEDRLTSG
GRIPLKVKPTLTIAELKREISDKYSFPEQVQNWIVGKRLAKDHDNLAGLGVRSGSSVYLY
LKSAQSVGLTKEQYENQKLAMLYPNQGDGAANLASPLNGQLGAEGGARRGQTTPGAHTPD
VIFNTIQNTRPENQQRGNQMAATHIGAVRDHDDYHGPTSITRRPTEPPPPPPTQRQRSRE
VGWECPTCTFLNEPTRPGCEMCSTTKPDDFVLPDDYVPTDREKERLEQEARNRELLQQAQ
ERDEQMRLQQRQANFANLIAAAEENDLIANLEEFDCLICFLTIERGEGVILRDCLHSFCR
DCLRDHITHNEEAVVMCPFQDDVYSCHSAMTEREIKALVSAEQFQKYLQRGLHTAENMAA
DSYHCKTPDCQGWCYYDDNNNFFQCPVCHKKNCLTCKAIHEGLNCKQYQDDLRRRAENDT
AAKQTKEMLEQLVADGEAMHCPRCNIILQKKEGCDWLRCTMCKLEICWVTKGPRWGEGGQ
GDVSGGCRCRVGGRKCHPNCRNCH
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaggtacaatgttactgtcaaaagaggcgcaattgttgcgttttgagccaagt
aattacgattatccttggtgttccatcgttgatccaaacgacagggaaggcacaccagct
attgtacaaatcttcgagcagcctcacggaaggtttcacatcacatcaaaacaccgaggt
tcgcaggcacctttacttgggttcaacctgaatgaagtggattatgtgatcaaaaatacg
gagtggcatgaggtgaccatgcagagaaatcagaagtatgctatcgtgttccatggcaaa
gctgaaggtcagggatttgcaacggtggtgcaaaactcccttcatgaaattaagagagcg
ggtacagataccagtagcacaaggctcggcaatgtcggtatacctctgccaggattgacc
ccaccaaagtcaccaaaagaggcatgggttccacctggaaacatgccgcaaggcgcaagg
ataagaagtgctacgctaggccccaggcttccatcagccaaatctccatcagtcaatgtt
gcaaggataccaaatgtgccgcttcttgaacagttaaatcaagccattgcacgcggtgac
gtcgacgctgcccaagccctcgctgttatgctagctaaagaaaaggagcaaacccgatgg
gatcaaggcccacaaactatcaatatacgtatccacatagaagatagattaacatcagga
ggtaggatacctctcaaagttaagccaacattgacaatagccgaactaaagagagagatc
agcgacaagtactcattccctgaacaagtccaaaattggattgttggcaaaagacttgct
aaggatcatgacaacctggctgggctaggagtaaggtcaggttcatcagtgtatctgtat
ttgaagtcagcccagagtgtggggctaacaaaagaacagtatgaaaaccaaaagcttgca
atgctgtatcccaatcagggagatggggctgccaatttggccagtcctctgaatggacaa
ttgggtgctgagggaggtgccaggaggggacaaaccacaccgggtgctcacacgccagat
gttattttcaacacaatacagaatacgcgtccagaaaatcagcagagaggaaaccaaatg
gccgcaactcacattggggcagtgagagaccacgacgactaccatggcccaacgtccatc
acaagacgaccaacagaacctccaccaccacctccaacacaaagacagaggagtagagag
gttggatgggaatgtcccacatgtaccttcctcaatgaaccgactcgaccagggtgtgaa
atgtgcagtaccaccaaacctgacgactttgtcctgcccgatgactatgtgccaactgac
agagaaaaggaaagattggagcaagaagctcgtaatagagaactacttcaacaggcacag
gagagagatgagcagatgagactacaacagcgccaggccaactttgcaaatctgatcgca
gcagctgaagagaatgatctgatagccaatcttgaagagtttgattgcctgatatgtttt
ttgactattgagcgtggtgagggcgtcattctcagagattgtctccattctttctgtagg
gattgtttgagagatcatatcactcacaatgaggaggcggtcgtgatgtgtcccttccaa
gatgatgtgtattcttgccattctgcaatgaccgagagagaaatcaaggcgttggtctct
gcagagcagttccaaaaatacctacaacgaggcctccacacagctgagaacatggcagcc
gatagctaccactgcaagacacctgactgtcagggatggtgttactatgacgacaacaac
aacttcttccagtgtcccgtatgccacaagaagaactgcctgacttgcaaggccatccat
gaagggttgaactgtaagcagtaccaggatgatttgagacgaagagcggagaatgacaca
gctgccaaacagaccaaggagatgctagagcaactggtagctgacggagaagccatgcac
tgtccacgctgtaacatcattctgcagaagaaggaaggctgtgattggctgcgatgcacc
atgtgtaaactcgaaatctgctgggtgactaaggggcctagatggggagaagggggccaa
ggtgatgtcagtggtggctgtcggtgcagggttggtggcagaaaatgtcatccaaattgc
aggaactgtcactga
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