Ptychodera flava: 139117870
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Entry
139117870 CDS
T10724
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pfll Ptychodera flava
Pathway
pfll03013
Nucleocytoplasmic transport
pfll03015
mRNA surveillance pathway
pfll03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139117870
09122 Translation
03013 Nucleocytoplasmic transport
139117870
03015 mRNA surveillance pathway
139117870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139117870
03041 Spliceosome [BR:
pfll03041
]
139117870
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139117870
Spliceosome [BR:
pfll03041
]
Complex C
Other components
EJC/TREX
139117870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
139117870
NCBI-ProteinID:
XP_070537205
LinkDB
All DBs
Position
18:complement(1093022..1096434)
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AA seq
234 aa
AA seq
DB search
MVEDGFWIDKIKSHCFVTYEAEEDAITTREALHGTKWPSSNPKNLIVEYAQQSEIDRQKG
ITDRTEVKVEEKQGMVSRERRDSQRDRDRERRERERERERGRDRDRDQDRMKRRERSTSR
ENKRRERERGDKQQREVKSKYYRRSRTREPPAKLLDDLFRKTKATPCIYWLPLTQQEIAV
KEKERLERNKQREERRKKIEQERQEEEERREKERQKRRQEQRRSRSRSRDRRRR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagatggattctggattgataaaattaaatctcactgctttgtaacttatgag
gcagaggaggatgcaatcacaacacgtgaagctctccatggtaccaagtggccatccagt
aacccaaagaatctcattgtagaatacgcccaacaatcagagattgacaggcagaagggc
atcacagacagaacagaggtcaaagttgaagaaaagcaaggcatggtgagcagagaacgt
agagactctcagagagatagggacagagagagaagggaaagagagagagaaagagagaga
ggaagagacagggacagagatcaggatagaatgaaacgaagagagagaagtacatcaaga
gaaaataaaaggagagaacgtgaaagaggagataaacaacagagagaggttaaaagtaag
tattacagaagaagcagaaccagagaacctccagccaagctacttgatgacttgttccgt
aaaaccaaagccacaccatgcatttattggctacctttaacacagcaagagattgccgtc
aaagaaaaggaaagactggaaagaaacaaacagagagaagagagacggaaaaagattgaa
caggaaagacaggaggaagaagagagaagggaaaaagaaagacagaaacgtcgtcaagag
caaagacgaagcagatcaagatcacgtgacagacggcggagatag
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