Ptychodera flava: 139117955
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Entry
139117955 CDS
T10724
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
pfll Ptychodera flava
Pathway
pfll03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139117955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfll03021
]
139117955
03041 Spliceosome [BR:
pfll03041
]
139117955
03036 Chromosome and associated proteins [BR:
pfll03036
]
139117955
Transcription machinery [BR:
pfll03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
139117955
Spliceosome [BR:
pfll03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
139117955
Complex B
139117955
Complex C
U2 SnRNP specific factors
139117955
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
139117955
TFTC complex
139117955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
139117955
NCBI-ProteinID:
XP_070537308
LinkDB
All DBs
Position
18:895319..931292
Genome browser
AA seq
1213 aa
AA seq
DB search
MFLYALTLQRATGITHVIYGNFSGTKQQELVVSRGKILEILRPDPNTGKIYTMLTQEIFG
VIRSLVAFRLTGGTKDYIIVGSDSGRIVILEYIPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGSVEKQKLVYILNRDAQARLTISSPLEAHKSSTFCYHMVGIDIGFENP
CFACLEVDYEEADSDPAGEAVQNTQQMLTFYELDLGLNHVVRKYSEPLEEHGNFLIAVPG
GNEGPSGVLICSENYITYKNFGDQPDIRMPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLTQTEQGDIFKITLETDEDMVTEIRMKYFDTVPVATSLCVLKTGFLYLAAEFGNHVLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLKNLVLVDEMESLSPILSCQIADLANEDT
PQLYTACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRKAVEEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLIGDDALLQIYPEGIRHIRADKRVNEWRTPG
KKSIVKCAVNQRQVVIALTGGELVYFEMDPAGQLNEYTERKEMSADVQCMSLASVPSGEQ
RSRFLAVGLADNTVRIISLDPSDCLQPLSMQALPALAESLCIVEMASGETGMLESVSGLL
YLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVKMQGNEAVLAMSSRSWLSY
WYQSRFHLTPLSYETLEYASSFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSIPLKY
TPRKFVVHQDGNKLVLIETDHNAYTDATKTQRKQQMAEEMVEAAGEEEQELAAEMAAAFM
NENLPEDVFGSPKAGTGMWASVIRVLNPISGKSVQVEHLEQNEAAFSVAICKFANRGDDT
FILVGVAKDMTLSPRHCSEGYIYTYQLKDDDSLELLHKTAVDEVPSAICPFQGRVLIGVG
KLLRLYDMGKKKLLRKCENKHIPTXIVNINVMGSRIVVSDVQESFHFLRYKHQENQMIIF
ADDTNPRFITASCTLDYDTVAAADKFGNITVVRMPPNTNDDVDEDPTGNKALWDRGLLNG
ASQKADIIANFHIGETVCSLQKATLIPGGSESLVYTTLSGSVGMLVPFTSHEDHDFFQHL
EMHIRSEFPPLCGRDHLSYRSYFFPLKNVIDGDLCEQFNSMDPARQRSVAEELDRNPSEV
SKKLEDIRTRYAF
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctatgcactgacactgcagcgtgccactggcattacccatgtcatatatggc
aacttcagtggcacaaaacaacaggagttggttgtatccaggggcaaaatcctggaaatt
ctgcgtccagatcccaatactggcaaaatatacaccatgctgacacaagagatctttggc
gtcatcagatccctggtagcattcaggcttactggaggaactaaagattacatcatagtt
ggctcagattctggaagaattgtgattttggaatacattccatccaaaaatatgtttgaa
aagattcatcaggagacttttggtaaaagtggatgtagacgcattgtgccaggtcagttt
ctagctgttgatcctaaaggccgtgctgtgatgattggttctgtggagaaacagaagcta
gtgtacatcttgaacagagatgcccaggccaggttgacaatctcctcacctcttgaagca
cacaaatccagcacattctgctatcatatggttggaattgacattggctttgaaaatcct
tgctttgcatgtcttgaggtagactatgaggaagcagatagcgacccagctggagaggca
gtacagaacacacagcaaatgttgacattttatgaacttgaccttggacttaaccacgtg
gttagaaagtacagtgaaccccttgaagaacacggcaactttcttatcgcagtgcctggt
ggcaatgaaggacccagtggagttctcatctgttcggaaaattacatcacatataaaaac
tttggtgatcagccagacatccgaatgcctattcccaggagaaggaatgatttggatgat
ccagagagaggaatgatctttgtttgtagtgcaactcacaagaccaagtccatgtttttc
tttttgacacaaacagagcaaggagacattttcaagatcaccttggaaacagatgaagac
atggtgacagaaatacgaatgaagtactttgacactgtaccagttgccacttcactatgt
gttctcaagactggattcttgtatttggctgcagagtttggaaaccatgtactctatcag
atagcacatctcggtgacgatgatgatgaaccagagtttagcagtgcgatgccattggaa
gaaggagatacgttcttctttgcaccaaggcctctgaaaaatttggtccttgtagatgaa
atggaaagtctatcacccatcttatcatgccagattgctgacctggccaatgaggataca
ccacagttgtatactgcctgtggaagaggacccagatcatctctccgagttcttagacat
ggtcttgaagtatcagaaatggctgtctctgagttgccaggtaatcccaatgctgtatgg
actgtgagaaaggctgttgaagaggagtatgatgcgtacatcatagtgtctttcgtcaat
gctaccttggtattgtctattggtgagactgtagaagaagtcacagattccggtttcctt
ggtaccacacccaccctgtcatgttccttgattggagatgatgcattactgcagatttat
ccagaaggtatccgtcacatcagagctgataaacgtgtcaatgaatggagaactccagga
aagaaaagtatagtgaaatgtgctgtcaatcagagacaggttgtgattgcactgactggt
ggagaacttgtgtattttgaaatggatccggcaggtcaactcaatgaatatacagagcgt
aaagagatgtcagctgatgtccagtgtatgagtttagccagtgtaccatcaggtgaacag
aggtcaagatttctggccgttggtctggctgataatactgtcaggataatatcgcttgac
ccgtctgattgcttacaaccattgagtatgcaagcgctgcctgccttagctgaatcactg
tgtattgtagaaatggcaagtggagagactggaatgctagaatcagtctctggtttgctt
tatctcaatatcggattgcagaatggtgtgttactgcgtacggtattggatccagtgact
ggagacctgtcagacacacgtaccagatacttaggatccagacctgtcaaactcttcaga
gtcaagatgcaaggcaatgaagctgtgttggcaatgtcaagtcgttcatggctgagttac
tggtaccagtcaagatttcatcttacaccgttgtcctatgaaacattagagtatgcatcc
agctttgcttcagagcaatgtccagagggtatcgttgccatatcaacaaacactctcagg
attttggctttagagaagctaggagctgtcttcaaccaagtatccattccactcaagtac
actccaaggaagtttgttgttcaccaagatggcaacaaactggttctcatagaaactgac
cacaatgcatacacagatgcaacaaagacacagagaaaacaacaaatggcagaggaaatg
gtagaagcagcaggggaggaggaacaggagctggcagcagaaatggcagcagctttcatg
aatgaaaacttgccagaagatgtctttggatctcccaaggcaggaaccggaatgtgggcg
tcagtaatacgagtattaaacccaatatcaggcaaatcagtacaagttgaacacctggaa
cagaatgaagcagccttcagcgtggccatttgcaagtttgcaaatcgaggtgatgataca
ttcatcctggttggtgttgccaaggatatgacattgagtccaagacactgttcagaaggt
tacatttatacttaccagctcaaagatgatgactccttagagcttttacacaagactgca
gttgatgaagtcccctcagctatttgtccattccaaggtcgtgttttgataggcgttgga
aaattactgcgactgtatgacatgggaaagaaaaaactactcagaaaatgtgaaaataaa
cacatcccaactnncattgtgaatatcaatgtgatgggcagtcgcatcgttgtcagtgac
gtacaagagagtttccacttcttgagatataaacaccaggaaaatcaaatgattatattt
gccgatgacaccaaccctagattcatcacagcatcctgtacattagactacgatacagtc
gctgccgctgacaagtttggtaatattacagtggtacgaatgccgcccaacacaaatgat
gatgtagatgaagatccaactggtaacaaagcattgtgggatagaggattgttgaatggt
gcatcacagaaggcagatattattgccaactttcatatcggtgagacggtgtgttcattg
cagaaggcaacgttgattcctggaggctcagagtcattggtttacacaaccctgtctgga
agtgtaggaatgcttgtaccgtttacatcacatgaggaccatgactttttccaacacttg
gagatgcacattagatcagagtttccacctctatgtggcagagaccatctctcatacaga
tcatatttctttccattgaagaatgtaattgatggtgacctatgtgaacagttcaattca
atggatccagccaggcagcgaagtgtagctgaggaattagatagaaatcctagtgaggtt
tctaagaagttagaagatatcagaacacgctatgcattttaa
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